RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 IDH1O75874 414 aaKnown RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 VEGFAP15692 232 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 TRIM21P19474 475 aaKnown RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 TTLL5Q6EMB2 1281 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 LGR6Q9HBX8 967 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 PRDM5Q9NQX1 630 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 GPHNQ9NQX3 736 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 ATG3Q9NT62 314 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 NOP2P46087 812 aaKnown RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 KIF4BQ2VIQ3 1234 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 CNTROBQ8N137 903 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 CUL5Q93034 780 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 NBPF3Q9H094 633 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 SLKQ9H2G2 1235 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 KCNH4Q9UQ05 1017 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 NOD1Q9Y239 953 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 COL22A1Q8NFW1 1626 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 INSRP06213 1382 aa3.51□□□□□ -1.85
NEDD4-208ENST00000508342 VIRMAQ69YN4 1812 aaKnown RBP3.51□□□□□ -1.85
NEDD4-208ENST00000508342 CPLX1O14810 134 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 FSTL1Q12841 308 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 SMIM5Q71RC9 77 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 LDHDQ86WU2 507 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 PAGR1Q9BTK6 254 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 DIAPH3Q9NSV4 1193 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 LMO7Q8WWI1 1683 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 KIF16BQ96L93 1317 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 PRR36Q9H6K5 1346 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 RIOK3O14730 519 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 RAB3GAP1Q15042 981 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 PCMTD1Q96MG8 357 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 SPC25Q9HBM1 224 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 LRRC37A3O60309 1634 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 H3BQV1 296 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 GLRX3O76003 335 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 IFFO2Q5TF58 517 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 COA7Q96BR5 231 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 DRC1Q96MC2 740 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 CLRN2A0PK11 232 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 TMPOP42166 694 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 GTF2IP78347 998 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 MVPQ14764 893 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 SART3Q15020 963 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 CCDC174Q6PII3 467 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 TMC4Q7Z404 712 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 BRINP2Q9C0B6 783 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 NOB1Q9ULX3 412 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 NHSQ6T4R5 1651 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 MYOM1P52179 1685 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 ITGB4P16144 1822 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 CCDC129Q6ZRS4 1044 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 TSR2Q969E8 191 aaKnown RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 IQSEC3Q9UPP2 1182 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 ERBB3P21860 1342 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 MAP4K4O95819 1239 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-208ENST00000508342 TPM1P09493 284 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 SCNN1DP51172 638 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 MAP3K12Q12852 859 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 SCARF1Q14162 830 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 DEFB115Q30KQ5 88 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 ZKSCAN2Q63HK3 967 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 PLBD2Q8NHP8 589 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 TSKSQ9UJT2 592 aa3.5□□□□□ -1.85
NEDD4-208ENST00000508342 MAP3K15Q6ZN16 1313 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 HIBADHP31937 336 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CSPP1Q1MSJ5 1256 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 NLGN2Q8NFZ4 835 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CRNKL1Q9BZJ0 848 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ADARB2Q9NS39 739 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 POLKQ9UBT6 870 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 NRXN3Q9Y4C0 1643 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 B4DLN1 442 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 PLSCR1O15162 318 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 EIF3JO75822 258 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 IPO7O95373 1038 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ITGA6P23229 1130 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 RDXP35241 583 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 MRPL12P52815 198 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CHADLQ6NUI6 762 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 AACSQ86V21 672 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 GPR101Q96P66 508 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ZBTB12Q9Y330 459 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 PNPLA7Q6ZV29 1317 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CHD4Q14839 1912 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 MINDY4BA8MYZ0 360 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 IGSF3O75054 1194 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 GNAI3P08754 354 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CTSWP56202 376 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 HUNKP57058 714 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ANKRD20A12PQ8NF67 263 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ARHGEF10LQ9HCE6 1279 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 NARFQ9UHQ1 456 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 AXIN2Q9Y2T1 843 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 CCDC69A6NI79 296 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 SAFBQ15424 915 aaKnown RBP eCLIP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 ZNF827Q17R98 1081 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 RC3H1Q5TC82 1133 aaKnown RBP3.49□□□□□ -1.85
NEDD4-208ENST00000508342 UBE3BQ7Z3V4 1068 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 DNAAF4Q8WXU2 420 aa3.49□□□□□ -1.85
NEDD4-208ENST00000508342 FSD1Q9BTV5 496 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms