RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 NPC1L1Q9UHC9 1359 aa10.25□□□□□ -0.77
CCDC149-206ENST00000508236 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
CCDC149-206ENST00000508236 MYOM1P52179 1685 aa10.25□□□□□ -0.77
CCDC149-206ENST00000508236 ASXL1Q8IXJ9 1541 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 OPLAHO14841 1288 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 CPNE3O75131 537 aaKnown RBP10.24□□□□□ -0.77
CCDC149-206ENST00000508236 SOGA3Q5TF21 947 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 VPS37DQ86XT2 251 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 ZNF295-AS1Q8N0V1 137 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
CCDC149-206ENST00000508236 FAM13BQ9NYF5 915 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
CCDC149-206ENST00000508236 MLH3Q9UHC1 1453 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 HECW2Q9P2P5 1572 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 SETBP1Q9Y6X0 1596 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 SIAH2O43255 324 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 RPLP1P05386 114 aaKnown RBP10.23□□□□□ -0.77
CCDC149-206ENST00000508236 NR3C2P08235 984 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 CENPCQ03188 943 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 CLN3Q13286 438 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC149-206ENST00000508236 PPP1R18Q6NYC8 613 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
CCDC149-206ENST00000508236 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 PPLO60437 1756 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
CCDC149-206ENST00000508236 A6NHS1 94 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 CD2BP2O95400 341 aaKnown RBP10.22□□□□□ -0.77
CCDC149-206ENST00000508236 ADH1AP07327 375 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 LHX8Q68G74 356 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 ZNF662Q6ZS27 426 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 CD109Q6YHK3 1445 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 POGZQ7Z3K3 1410 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 ADGRB3O60242 1522 aa10.22□□□□□ -0.77
CCDC149-206ENST00000508236 GIPC1O14908 333 aa10.21□□□□□ -0.77
CCDC149-206ENST00000508236 GGCXP38435 758 aa10.21□□□□□ -0.77
CCDC149-206ENST00000508236 RRP1P56182 461 aaKnown RBP10.21□□□□□ -0.77
CCDC149-206ENST00000508236 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
CCDC149-206ENST00000508236 PIF1Q9H611 641 aa10.21□□□□□ -0.77
CCDC149-206ENST00000508236 C12orf49Q9H741 205 aa10.21□□□□□ -0.77
CCDC149-206ENST00000508236 ZSWIM4Q9H7M6 989 aa10.21□□□□□ -0.77
CCDC149-206ENST00000508236 USP31Q70CQ4 1352 aa10.21□□□□□ -0.78
CCDC149-206ENST00000508236 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
CCDC149-206ENST00000508236 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
CCDC149-206ENST00000508236 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
CCDC149-206ENST00000508236 MCF2L2Q86YR7 1114 aa10.2□□□□□ -0.78
CCDC149-206ENST00000508236 KDF1Q8NAX2 398 aaPredicted RBP10.2□□□□□ -0.78
CCDC149-206ENST00000508236 NEO1Q92859 1461 aa10.2□□□□□ -0.78
CCDC149-206ENST00000508236 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
CCDC149-206ENST00000508236 OSBPL7Q9BZF2 842 aa10.2□□□□□ -0.78
CCDC149-206ENST00000508236 UGGT1Q9NYU2 1555 aa10.2□□□□□ -0.78
CCDC149-206ENST00000508236 SBNO2Q9Y2G9 1366 aa10.2□□□□□ -0.78
CCDC149-206ENST00000508236 ZC3H13Q5T200 1668 aaKnown RBP10.19□□□□□ -0.78
CCDC149-206ENST00000508236 FRMPD1Q5SYB0 1578 aa10.19□□□□□ -0.78
CCDC149-206ENST00000508236 ERVK-7P63135 1459 aa10.19□□□□□ -0.78
CCDC149-206ENST00000508236 RPGRIP1LQ68CZ1 1315 aa10.19□□□□□ -0.78
CCDC149-206ENST00000508236 STK10O94804 968 aaKnown RBP10.19□□□□□ -0.78
CCDC149-206ENST00000508236 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
CCDC149-206ENST00000508236 CAMSAP1Q5T5Y3 1602 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 ADGRF5Q8IZF2 1346 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 MICAL2O94851 1124 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC149-206ENST00000508236 TAF1CQ15572 869 aaPredicted RBP10.18□□□□□ -0.78
CCDC149-206ENST00000508236 SDE2Q6IQ49 451 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 PI16Q6UXB8 463 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 CCDC74AQ96AQ1 378 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 NLRP3Q96P20 1036 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 ZSCAN10Q96SZ4 725 aaPredicted RBP10.18□□□□□ -0.78
CCDC149-206ENST00000508236 NOP58Q9Y2X3 529 aaKnown RBP10.18□□□□□ -0.78
CCDC149-206ENST00000508236 TBX22Q9Y458 520 aa10.18□□□□□ -0.78
CCDC149-206ENST00000508236 SENP3-EIF4A1A0A087X0R7 540 aa10.17□□□□□ -0.78
CCDC149-206ENST00000508236 FGRP09769 529 aa10.17□□□□□ -0.78
CCDC149-206ENST00000508236 GJA8P48165 433 aa10.17□□□□□ -0.78
CCDC149-206ENST00000508236 MEI1Q5TIA1 1274 aa10.17□□□□□ -0.78
CCDC149-206ENST00000508236 EPS8L3Q8TE67 593 aaKnown RBP10.17□□□□□ -0.78
CCDC149-206ENST00000508236 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC149-206ENST00000508236 OSBPL2Q9H1P3 480 aa10.17□□□□□ -0.78
CCDC149-206ENST00000508236 ABCC3O15438 1527 aa10.17□□□□□ -0.78
CCDC149-206ENST00000508236 NOS1P29475 1434 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 QRICH2Q9H0J4 1663 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 MEN1O00255 615 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 TXLNAP40222 546 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 PTGIRP43119 386 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 ST13P50502 369 aaKnown RBP10.16□□□□□ -0.78
CCDC149-206ENST00000508236 KCNC4Q03721 635 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 FAM8A1Q9UBU6 413 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 ADAMTS8Q9UP79 889 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 NPATQ14207 1427 aa10.16□□□□□ -0.78
CCDC149-206ENST00000508236 PIK3C2BO00750 1634 aa10.15□□□□□ -0.78
CCDC149-206ENST00000508236 TNFRSF21O75509 655 aa10.15□□□□□ -0.78
CCDC149-206ENST00000508236 ATF4P18848 351 aaPredicted RBP10.15□□□□□ -0.78
CCDC149-206ENST00000508236 IRS1P35568 1242 aa10.15□□□□□ -0.78
CCDC149-206ENST00000508236 CBLBQ13191 982 aa10.15□□□□□ -0.78
CCDC149-206ENST00000508236 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms