RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 OGFOD1Q8N543 542 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 DDX54Q8TDD1 881 aaKnown RBP6.41□□□□□ -1.38
CPNE4-207ENST00000506687 PRIMPOLQ96LW4 560 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 ADAMTS8Q9UP79 889 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 SPG7Q9UQ90 795 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 PASKQ96RG2 1323 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 PCDH11XQ9BZA7 1347 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 PCDH11YQ9BZA8 1340 aa6.41□□□□□ -1.38
CPNE4-207ENST00000506687 WDR33Q9C0J8 1336 aaKnown RBP6.41□□□□□ -1.38
CPNE4-207ENST00000506687 POTECB2RU33 542 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 ATMINO43313 823 aaPredicted RBP6.4□□□□□ -1.38
CPNE4-207ENST00000506687 MARCH6O60337 910 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 FXR1P51114 621 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPNE4-207ENST00000506687 SLFNL1Q499Z3 407 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 AKAP4Q5JQC9 854 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 IFNL2Q8IZJ0 200 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 SLC17A8Q8NDX2 589 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
CPNE4-207ENST00000506687 PIM2Q9P1W9 311 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 TMA7Q9Y2S6 64 aaKnown RBP6.4□□□□□ -1.38
CPNE4-207ENST00000506687 BTAF1O14981 1849 aa6.4□□□□□ -1.38
CPNE4-207ENST00000506687 KAT6BQ8WYB5 2073 aa6.4□□□□□ -1.39
CPNE4-207ENST00000506687 CCER2I3L3R5 266 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 CA12O43570 354 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 C21orf2O43822 256 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 SLC10A3P09131 477 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 MMP10P09238 476 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 RAD51AP2Q09MP3 1159 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 MRPL58Q14197 206 aaKnown RBP6.39□□□□□ -1.39
CPNE4-207ENST00000506687 COL19A1Q14993 1142 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 DALRD3Q5D0E6 543 aaKnown RBP6.39□□□□□ -1.39
CPNE4-207ENST00000506687 ZNF530Q6P9A1 599 aaPredicted RBP6.39□□□□□ -1.39
CPNE4-207ENST00000506687 C3orf67Q6ZVT6 689 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 SMIM5Q71RC9 77 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 TAS1R3Q7RTX0 852 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 RNF135Q8IUD6 432 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 IL17REQ8NFR9 667 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 CXXC1Q9P0U4 656 aaPredicted RBP6.39□□□□□ -1.39
CPNE4-207ENST00000506687 PRKAG2Q9UGJ0 569 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 KDM6AO15550 1401 aaPredicted RBP6.39□□□□□ -1.39
CPNE4-207ENST00000506687 ADAMTS7Q9UKP4 1686 aa6.39□□□□□ -1.39
CPNE4-207ENST00000506687 C19orf67A6NJJ6 358 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 ERVV-2B6SEH9 535 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 RNMTO43148 476 aaKnown RBP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 SEC24BO95487 1268 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 HSP90AB1P08238 724 aaKnown RBP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 LMNB1P20700 586 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 KCNA3P22001 575 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 PACS2Q86VP3 889 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 NT5DC4Q86YG4 428 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 PLPP7Q8NBV4 271 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 GAS2L2Q8NHY3 880 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 GTF3C2Q8WUA4 911 aaPredicted RBP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 PIGBQ92521 554 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 PNNQ9H307 717 aaKnown RBP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 MRS2Q9HD23 443 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 CCDC87Q9NVE4 849 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 DNAAF2Q9NVR5 837 aaKnown RBP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 CEP126Q9P2H0 1117 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.38□□□□□ -1.39
CPNE4-207ENST00000506687 TOGARAM1Q9Y4F4 1720 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 TUBGCP6Q96RT7 1819 aa6.38□□□□□ -1.39
CPNE4-207ENST00000506687 ITGB4P16144 1822 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 SCN11AQ9UI33 1791 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 CEMIPQ8WUJ3 1361 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 HTATSF1O43719 755 aaKnown RBP6.37□□□□□ -1.39
CPNE4-207ENST00000506687 ATP2B1P20020 1258 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 TMPOP42166 694 aaKnown RBP6.37□□□□□ -1.39
CPNE4-207ENST00000506687 CLDN10P78369 228 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 MTMR3Q13615 1198 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 NFE2L2Q16236 605 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 ECM1Q16610 540 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 OCLNQ16625 522 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 EML3Q32P44 896 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 CCDC144BQ3MJ40 725 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 GRIPAP1Q4V328 841 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 MPRIPQ6WCQ1 1025 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 TMEM87AQ8NBN3 555 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 RUNDC1Q96C34 613 aa6.37□□□□□ -1.39
CPNE4-207ENST00000506687 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
CPNE4-207ENST00000506687 IQSEC3Q9UPP2 1182 aaPredicted RBP6.37□□□□□ -1.39
CPNE4-207ENST00000506687 TLDC2A0PJX2 215 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 GNAT3A8MTJ3 354 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 P4HBP07237 508 aaKnown RBP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 ECE1P42892 770 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 ARHGAP4P98171 946 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 FKBP4Q02790 459 aaKnown RBP eCLIP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 FUT2Q10981 343 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 WDR43Q15061 677 aaKnown RBP eCLIP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 C1orf141Q5JVX7 400 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 LDLRAD1Q5T700 205 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 AMIGO3Q86WK7 504 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 LDHDQ86WU2 507 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 CCDC146Q8IYE0 955 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 RGL4Q8IZJ4 473 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 GPR101Q96P66 508 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-207ENST00000506687 TINF2Q9BSI4 451 aa6.36□□□□□ -1.39
CPNE4-207ENST00000506687 MKNK1Q9BUB5 465 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms