RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 PRIMPOLQ96LW4 560 aa8.96□□□□□ -0.98
PPARGC1A-204ENST00000506055 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.98
PPARGC1A-204ENST00000506055 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
PPARGC1A-204ENST00000506055 MAST3O60307 1309 aa8.96□□□□□ -0.98
PPARGC1A-204ENST00000506055 PDIA3P30101 505 aaKnown RBP8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 HMGN5P82970 282 aaKnown RBP8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 CCDC57Q2TAC2 916 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 RBM43Q6ZSC3 357 aaKnown RBP8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 GPR108Q9NPR9 543 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 PCDH11XQ9BZA7 1347 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 PCDH11YQ9BZA8 1340 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 ME1P48163 572 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 LRMPQ12912 555 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 NAA16Q6N069 864 aaPredicted RBP8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 CADPS2Q86UW7 1296 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 OSBP2Q969R2 916 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 USP28Q96RU2 1077 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 MAP7D2Q96T17 732 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 KIF3AQ9Y496 699 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 SPATA31A3Q5VYP0 1347 aa8.95□□□□□ -0.98
PPARGC1A-204ENST00000506055 TNS3Q68CZ2 1445 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 COL18A1P39060 1754 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 A0A087WWV3 80 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 ADORA1P30542 326 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 CCDC158Q5M9N0 1113 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 TTC39AQ5SRH9 613 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 FAM89AQ96GI7 184 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 GOLPH3LQ9H4A5 285 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 ERVV-2B6SEH9 535 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 ZNF75DP51815 510 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 ERCC4Q92889 916 aaPredicted RBP8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 FBXW7Q969H0 707 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 CLIP2Q9UDT6 1046 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 RCOR1Q9UKL0 485 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 ADAMTSL3P82987 1691 aa8.94□□□□□ -0.98
PPARGC1A-204ENST00000506055 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 SNW1Q13573 536 aaKnown RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 TAF7LQ5H9L4 462 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 OTUD7BQ6GQQ9 843 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 CCDC73Q6ZRK6 1079 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 PLA2G4DQ86XP0 818 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 RAB11FIP4Q86YS3 637 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 TDRD7Q8NHU6 1098 aaKnown RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 ZNF274Q96GC6 653 aaPredicted RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 XAGE2Q96GT9 111 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 ZNF396Q96N95 335 aaPredicted RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 AGXT2Q9BYV1 514 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 STRN4Q9NRL3 753 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 KINO60870 393 aaKnown RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 CIAO1O76071 339 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 SCARF1Q14162 830 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 PI16Q6UXB8 463 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 C11orf57Q6ZUT1 292 aaPredicted RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 ILDR1Q86SU0 546 aaPredicted RBP8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 ATG3Q9NT62 314 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 WDR17Q8IZU2 1322 aa8.93□□□□□ -0.98
PPARGC1A-204ENST00000506055 FGAP02671 866 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 POLR3DP05423 398 aaPredicted RBP8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 FDPSP14324 419 aaKnown RBP8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 IMMTQ16891 758 aaKnown RBP8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 ZSCAN25Q6NSZ9 544 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 MTERF4Q7Z6M4 381 aaKnown RBP8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 SYNE4Q8N205 404 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 AKAP2Q9Y2D5 859 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 BECN2A8MW95 431 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 IL2RBP14784 551 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 ZAP70P43403 619 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 TCIRG1Q13488 830 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 CARMIL3Q8ND23 1372 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 PUS7LQ9H0K6 701 aaKnown RBP8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 SALL1Q9NSC2 1324 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 CTNNA3Q9UI47 895 aa8.92□□□□□ -0.98
PPARGC1A-204ENST00000506055 CPDO75976 1380 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 A0A1B0GVL5 298 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 FOXP2O15409 715 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 PRC1O43663 620 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 GTF2F1P35269 517 aaKnown RBP eCLIP8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 EVA1CP58658 441 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 FAM160A1Q05DH4 1040 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 IFIT5Q13325 482 aaKnown RBP8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 LRRFIP1Q32MZ4 808 aaKnown RBP8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 C16orf45Q96MC5 204 aaPredicted RBP8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 SDF4Q9BRK5 362 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 GJB4Q9NTQ9 266 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 PCDHA7Q9UN72 937 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 PKD1L3Q7Z443 1732 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 KLF18A0A0U1RQI7 1052 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 CTAGE5O15320 804 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 CAVIN2O95810 425 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 IQCB1Q15051 598 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 SF3A1Q15459 793 aaKnown RBP8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 STX1AQ16623 288 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 CCDC144BQ3MJ40 725 aa8.91□□□□□ -0.98
PPARGC1A-204ENST00000506055 CCDC144CPQ8IYA2 1237 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms