RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 RPS6KB1P23443 525 aa17.14■□□□□ 0.33
SH3D21-205ENST00000505871 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
SH3D21-205ENST00000505871 MCAMP43121 646 aa17.14■□□□□ 0.33
SH3D21-205ENST00000505871 ANKRD1Q15327 319 aa17.14■□□□□ 0.33
SH3D21-205ENST00000505871 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
SH3D21-205ENST00000505871 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SH3D21-205ENST00000505871 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
SH3D21-205ENST00000505871 SF3B3Q15393 1217 aaKnown RBP17.13■□□□□ 0.33
SH3D21-205ENST00000505871 CCDC102BQ68D86 513 aa17.13■□□□□ 0.33
SH3D21-205ENST00000505871 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
SH3D21-205ENST00000505871 MYH7P12883 1935 aa17.13■□□□□ 0.33
SH3D21-205ENST00000505871 SKOR2Q2VWA4 1001 aaPredicted RBP17.13■□□□□ 0.33
SH3D21-205ENST00000505871 SLFNL1Q499Z3 407 aa17.13■□□□□ 0.33
SH3D21-205ENST00000505871 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
SH3D21-205ENST00000505871 TBC1D9BQ66K14 1250 aa17.13■□□□□ 0.33
SH3D21-205ENST00000505871 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.33
SH3D21-205ENST00000505871 COL24A1Q17RW2 1714 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 ZPR1O75312 459 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 BRD1O95696 1058 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 CYP21A2P08686 494 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 HELBQ8NG08 1087 aaPredicted RBP17.12■□□□□ 0.33
SH3D21-205ENST00000505871 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 HSPD1P10809 573 aaKnown RBP17.12■□□□□ 0.33
SH3D21-205ENST00000505871 APPBP2Q92624 585 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 NEK1Q96PY6 1258 aa17.12■□□□□ 0.33
SH3D21-205ENST00000505871 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
SH3D21-205ENST00000505871 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
SH3D21-205ENST00000505871 M0R2C6 588 aa17.11■□□□□ 0.33
SH3D21-205ENST00000505871 PHKA1P46020 1223 aa17.11■□□□□ 0.33
SH3D21-205ENST00000505871 PI16Q6UXB8 463 aa17.11■□□□□ 0.33
SH3D21-205ENST00000505871 SETDB2Q96T68 719 aa17.11■□□□□ 0.33
SH3D21-205ENST00000505871 LARGE1O95461 756 aa17.1■□□□□ 0.33
SH3D21-205ENST00000505871 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
SH3D21-205ENST00000505871 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
SH3D21-205ENST00000505871 BICDL1Q6ZP65 573 aa17.1■□□□□ 0.33
SH3D21-205ENST00000505871 LARP6Q9BRS8 491 aaKnown RBP17.1■□□□□ 0.33
SH3D21-205ENST00000505871 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
SH3D21-205ENST00000505871 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
SH3D21-205ENST00000505871 CASZ1Q86V15 1759 aa17.1■□□□□ 0.33
SH3D21-205ENST00000505871 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
SH3D21-205ENST00000505871 CHRNDQ07001 517 aa17.09■□□□□ 0.33
SH3D21-205ENST00000505871 ME3Q16798 604 aa17.09■□□□□ 0.33
SH3D21-205ENST00000505871 SMIM5Q71RC9 77 aa17.09■□□□□ 0.33
SH3D21-205ENST00000505871 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
SH3D21-205ENST00000505871 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
SH3D21-205ENST00000505871 TPCN1Q9ULQ1 816 aa17.09■□□□□ 0.33
SH3D21-205ENST00000505871 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
SH3D21-205ENST00000505871 WDR33Q9C0J8 1336 aaKnown RBP17.08■□□□□ 0.33
SH3D21-205ENST00000505871 ADD2P35612 726 aa17.08■□□□□ 0.33
SH3D21-205ENST00000505871 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.33
SH3D21-205ENST00000505871 C4AP0C0L4 1744 aa17.08■□□□□ 0.32
SH3D21-205ENST00000505871 COL9A3Q14050 684 aaPredicted RBP17.08■□□□□ 0.32
SH3D21-205ENST00000505871 TOB2Q14106 344 aaPredicted RBP17.08■□□□□ 0.32
SH3D21-205ENST00000505871 UBE3CQ15386 1083 aa17.08■□□□□ 0.32
SH3D21-205ENST00000505871 C3orf67Q6ZVT6 689 aa17.08■□□□□ 0.32
SH3D21-205ENST00000505871 NBPF5PQ86XG9 351 aaPredicted RBP17.08■□□□□ 0.32
SH3D21-205ENST00000505871 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
SH3D21-205ENST00000505871 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.32
SH3D21-205ENST00000505871 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
SH3D21-205ENST00000505871 SPATA5Q8NB90 893 aa17.07■□□□□ 0.32
SH3D21-205ENST00000505871 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
SH3D21-205ENST00000505871 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
SH3D21-205ENST00000505871 COL4A1P02462 1669 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 A0A1B0GUL6 1792 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 RFC4P35249 363 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 SLC9C2Q5TAH2 1124 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 NLRP3Q96P20 1036 aa17.06■□□□□ 0.32
SH3D21-205ENST00000505871 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 ST3GAL1Q11201 340 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 RASGRF1Q13972 1273 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 LAMA4Q16363 1823 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 DOCK2Q92608 1830 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 SNAP23O00161 211 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 GPAA1O43292 621 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 IDH1O75874 414 aaKnown RBP17.05■□□□□ 0.32
SH3D21-205ENST00000505871 DHX32Q7L7V1 743 aaKnown RBP17.05■□□□□ 0.32
SH3D21-205ENST00000505871 FAM43AQ8N2R8 423 aa17.05■□□□□ 0.32
SH3D21-205ENST00000505871 FOXP2O15409 715 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 RTN4Q9NQC3 1192 aaKnown RBP17.04■□□□□ 0.32
SH3D21-205ENST00000505871 MYO5AQ9Y4I1 1855 aaKnown RBP17.04■□□□□ 0.32
SH3D21-205ENST00000505871 E7EWF7 191 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 PDIA4P13667 645 aaKnown RBP17.04■□□□□ 0.32
SH3D21-205ENST00000505871 PDE6AP16499 860 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 GJB2P29033 226 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 IMMTQ16891 758 aaKnown RBP17.04■□□□□ 0.32
SH3D21-205ENST00000505871 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
SH3D21-205ENST00000505871 Q6ZUG5 572 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
SH3D21-205ENST00000505871 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms