RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 GBP3Q9H0R5 595 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 AATFQ9NY61 560 aaKnown RBP eCLIP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 ITGB1BP2Q9UKP3 347 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 ARPC4P59998 168 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 GNPTABQ3T906 1256 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 CCAR2Q8N163 923 aaKnown RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 CHCHD4Q8N4Q1 142 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 AFAP1Q8N556 730 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 DDX27Q96GQ7 796 aaKnown RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 NAP1L3Q99457 506 aaPredicted RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 ZCCHC17Q9NP64 241 aaKnown RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 AHCYL1O43865 530 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 SEC24BO95487 1268 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 HDLBPQ00341 1268 aaKnown RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 WDR43Q15061 677 aaKnown RBP eCLIP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
LRMDA-208ENST00000496424 WDR37Q9Y2I8 494 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
LRMDA-208ENST00000496424 TROVE2P10155 538 aaKnown RBP eCLIP7.84□□□□□ -1.16
LRMDA-208ENST00000496424 HARSP12081 509 aaKnown RBP7.84□□□□□ -1.16
LRMDA-208ENST00000496424 THEMIS2Q5TEJ8 643 aa7.84□□□□□ -1.16
LRMDA-208ENST00000496424 CEP128Q6ZU80 1094 aa7.84□□□□□ -1.16
LRMDA-208ENST00000496424 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.84□□□□□ -1.16
LRMDA-208ENST00000496424 NEK9Q8TD19 979 aa7.84□□□□□ -1.16
LRMDA-208ENST00000496424 EPSTI1Q96J88 318 aa7.84□□□□□ -1.16
LRMDA-208ENST00000496424 EIF3AQ14152 1382 aaKnown RBP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PPP1R12BO60237 982 aaPredicted RBP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 ERCC5P28715 1186 aaPredicted RBP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 SCNN1BP51168 640 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 CLCN2P51788 898 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 CCDC170Q8IYT3 715 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 TBC1D31Q96DN5 1066 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PAPOLBQ9NRJ5 636 aaKnown RBP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PTPRCP08575 1304 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 SRGAP3O43295 1099 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 KDM1AO60341 852 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 FGFR1OPO95684 399 aaKnown RBP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 FERP16591 822 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 MCM3P25205 808 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PLA2G4AP47712 749 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 SH2D4BQ5SQS7 431 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 WAPLQ7Z5K2 1190 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 BICD2Q8TD16 824 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PARD6BQ9BYG5 372 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 RABEP2Q9H5N1 569 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 NLRP2Q9NX02 1062 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 GABBR1Q9UBS5 961 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PYCARDQ9ULZ3 195 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 TMEM98Q9Y2Y6 226 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 MCM2P49736 904 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 SNCBQ16143 134 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 ERCC6LQ2NKX8 1250 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 NLRP13Q86W25 1043 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 TRIM58Q8NG06 486 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 RASSF8Q8NHQ8 419 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 TBC1D5Q92609 795 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 CAPS2Q9BXY5 557 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 NAT10Q9H0A0 1025 aaKnown RBP7.83□□□□□ -1.16
LRMDA-208ENST00000496424 GPCPD1Q9NPB8 672 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 KLHL42Q9P2K6 505 aa7.83□□□□□ -1.16
LRMDA-208ENST00000496424 PLEKHH1Q9ULM0 1364 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 ARHGAP25P42331 645 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 ROR2Q01974 943 aaKnown RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 DCTN1Q14203 1278 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 IMMTQ16891 758 aaKnown RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 RNF187Q5TA31 235 aaPredicted RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 LMBR1Q8WVP7 490 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 SNX21Q969T3 373 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 OSBPL10Q9BXB5 764 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 DNAAF2Q9NVR5 837 aaKnown RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 CFAP45Q9UL16 551 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 TRIM64CA6NLI5 447 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 BECN2A8MW95 431 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 IL4RP24394 825 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 ZNF131P52739 623 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 MAP7Q14244 749 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 POSTNQ15063 836 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 SMARCC2Q8TAQ2 1214 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 SMARCC1Q92922 1105 aaPredicted RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 SPATA17Q96L03 361 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 EPAS1Q99814 870 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 CENPOQ9BU64 300 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 TNMDQ9H2S6 317 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 ZMYM3Q14202 1370 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 EIF4BP23588 611 aaKnown RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 KIF5BP33176 963 aa7.82□□□□□ -1.16
LRMDA-208ENST00000496424 KANK4Q5T7N3 995 aaPredicted RBP7.82□□□□□ -1.16
LRMDA-208ENST00000496424 CHD1O14646 1710 aa7.81□□□□□ -1.16
LRMDA-208ENST00000496424 POU5F1Q01860 360 aaKnown RBP7.81□□□□□ -1.16
LRMDA-208ENST00000496424 CATIPQ7Z7H3 387 aa7.81□□□□□ -1.16
LRMDA-208ENST00000496424 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
LRMDA-208ENST00000496424 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.81□□□□□ -1.161e-6■■■■■ 56.2
LRMDA-208ENST00000496424 VCX3BQ9H321 246 aa7.81□□□□□ -1.16
LRMDA-208ENST00000496424 DKK3Q9UBP4 350 aa7.81□□□□□ -1.16
LRMDA-208ENST00000496424 ELP1O95163 1332 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms