RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
HPS4-217ENST00000496385 TSGA10IPQ3SY00 556 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 EIF3CQ99613 913 aaKnown RBP10.56□□□□□ -0.72
HPS4-217ENST00000496385 DNAI1Q9UI46 699 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.56□□□□□ -0.72
HPS4-217ENST00000496385 GOLGA6L4A6NEF3 574 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 USP8P40818 1118 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 LMAN1P49257 510 aa10.56□□□□□ -0.72
HPS4-217ENST00000496385 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
HPS4-217ENST00000496385 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
HPS4-217ENST00000496385 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
HPS4-217ENST00000496385 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
HPS4-217ENST00000496385 PDCP20941 246 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
HPS4-217ENST00000496385 GPATCH11Q8N954 259 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 ZSCAN16Q9H4T2 348 aaPredicted RBP10.55□□□□□ -0.72
HPS4-217ENST00000496385 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
HPS4-217ENST00000496385 DACT1Q9NYF0 836 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 NPHP1O15259 732 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 LIG1P18858 919 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 IL13P35225 146 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 TWISTNBQ3B726 338 aaPredicted RBP10.55□□□□□ -0.72
HPS4-217ENST00000496385 PPP1R13BQ96KQ4 1090 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 STAP2Q9UGK3 403 aa10.55□□□□□ -0.72
HPS4-217ENST00000496385 SULT6B1Q6IMI4 303 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
HPS4-217ENST00000496385 A0A087WUV0 522 aaPredicted RBP10.54□□□□□ -0.72
HPS4-217ENST00000496385 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
HPS4-217ENST00000496385 MAP2K2P36507 400 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 TUBB4BP68371 445 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 E4F1Q66K89 784 aaPredicted RBP10.54□□□□□ -0.72
HPS4-217ENST00000496385 ANKRD20A12PQ8NF67 263 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 FUT8Q9BYC5 575 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 TOMM22Q9NS69 142 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 MAP2K7O14733 419 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
HPS4-217ENST00000496385 SASH3O75995 380 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 GJB2P29033 226 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 BRD3Q15059 726 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 STX1AQ16623 288 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 DNAJC25Q9H1X3 360 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 KCNG1Q9UIX4 513 aa10.54□□□□□ -0.72
HPS4-217ENST00000496385 CCDC151A5D8V7 595 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 AK2P54819 239 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 CAMK4Q16566 473 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 CKAP2LQ8IYA6 745 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 HNRNPLLQ8WVV9 542 aaKnown RBP10.53□□□□□ -0.72
HPS4-217ENST00000496385 RABGGTAQ92696 567 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 ZCCHC17Q9NP64 241 aaKnown RBP10.53□□□□□ -0.72
HPS4-217ENST00000496385 RBM28Q9NW13 759 aaKnown RBP10.53□□□□□ -0.72
HPS4-217ENST00000496385 EIF5P55010 431 aaKnown RBP10.53□□□□□ -0.72
HPS4-217ENST00000496385 RUFY3Q7L099 469 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 DDX54Q8TDD1 881 aaKnown RBP10.53□□□□□ -0.72
HPS4-217ENST00000496385 SUFUQ9UMX1 484 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 MEGF6O75095 1541 aa10.53□□□□□ -0.72
HPS4-217ENST00000496385 BECN2A8MW95 431 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 EIF3JO75822 258 aaKnown RBP10.52□□□□□ -0.73
HPS4-217ENST00000496385 SMC2O95347 1197 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 PRR29P0C7W0 189 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 IL2RBP14784 551 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 FCHSD1Q86WN1 690 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 TSPYL6Q8N831 410 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 TM6SF1Q9BZW5 370 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 RAI14Q9P0K7 980 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 ABCC6O95255 1503 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 TDO2P48775 406 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 GRIPAP1Q4V328 841 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 RAPGEF4Q8WZA2 1011 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 SNX14Q9Y5W7 946 aa10.52□□□□□ -0.73
HPS4-217ENST00000496385 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
HPS4-217ENST00000496385 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 SGSM2O43147 1006 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 EVCP57679 992 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 DDB1Q16531 1140 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 TADA2BQ86TJ2 420 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 SPATA32Q96LK8 384 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 NAT10Q9H0A0 1025 aaKnown RBP10.51□□□□□ -0.73
HPS4-217ENST00000496385 IGSF1Q8N6C5 1336 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 SEC31AO94979 1220 aaKnown RBP10.51□□□□□ -0.73
HPS4-217ENST00000496385 ERC1Q8IUD2 1116 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 EGFL6Q8IUX8 553 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 CNPY4Q8N129 248 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 STAG1Q8WVM7 1258 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 A1CFQ9NQ94 594 aaKnown RBP10.51□□□□□ -0.73
HPS4-217ENST00000496385 MBIPQ9NS73 344 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 ANO10Q9NW15 660 aa10.51□□□□□ -0.73
HPS4-217ENST00000496385 GOLGA6L9A6NEM1 432 aa10.5□□□□□ -0.73
HPS4-217ENST00000496385 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
HPS4-217ENST00000496385 RSRC2Q7L4I2 434 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms