RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 NFAT5O94916 1531 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 NSD2O96028 1365 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 NPC1L1Q9UHC9 1359 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 LTN1O94822 1766 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 RGPD5Q99666 1765 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 MAP3K19Q56UN5 1328 aa10.1□□□□□ -0.79
RPGR-210ENST00000494841 RNF144AP50876 292 aaPredicted RBP10.1□□□□□ -0.79
RPGR-210ENST00000494841 RNF217Q8TC41 542 aa10.1□□□□□ -0.79
RPGR-210ENST00000494841 SLC4A9Q96Q91 983 aa10.1□□□□□ -0.79
RPGR-210ENST00000494841 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
RPGR-210ENST00000494841 POLKQ9UBT6 870 aa10.1□□□□□ -0.79
RPGR-210ENST00000494841 SERTAD1Q9UHV2 236 aa10.1□□□□□ -0.79
RPGR-210ENST00000494841 TTLL8A6PVC2 850 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 GPC1P35052 558 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 AMPHP49418 695 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 SEC13P55735 322 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 TRIM47Q96LD4 638 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 BTG4Q9NY30 223 aa10.09□□□□□ -0.79
RPGR-210ENST00000494841 M0R2N6 131 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 MTHFSP49914 203 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 EPHA4P54764 986 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 CENPCQ03188 943 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 TLR1Q15399 786 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 HSP90AB2PQ58FF8 381 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 DIEXFQ68CQ4 756 aaKnown RBP10.08□□□□□ -0.8
RPGR-210ENST00000494841 LTV1Q96GA3 475 aaPredicted RBP10.08□□□□□ -0.8
RPGR-210ENST00000494841 PRKRIP1Q9H875 184 aaPredicted RBP10.08□□□□□ -0.8
RPGR-210ENST00000494841 RBM19Q9Y4C8 960 aaKnown RBP10.08□□□□□ -0.8
RPGR-210ENST00000494841 CPDO75976 1380 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 COL18A1P39060 1754 aa10.08□□□□□ -0.8
RPGR-210ENST00000494841 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 CAMTA1Q9Y6Y1 1673 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 AATKQ6ZMQ8 1374 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 PARD3Q8TEW0 1356 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 BACH1O14867 736 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 HOXC9P31274 260 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 SMTNP53814 917 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 EVA1CP58658 441 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 TSEN2Q8NCE0 465 aaKnown RBP10.07□□□□□ -0.8
RPGR-210ENST00000494841 FAM200AQ8TCP9 573 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 IP6K1Q92551 441 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 KIFC2Q96AC6 838 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 GRIP2Q9C0E4 1043 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 STRN4Q9NRL3 753 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 AFF2P51816 1311 aa10.07□□□□□ -0.8
RPGR-210ENST00000494841 COL14A1Q05707 1796 aaKnown RBP10.06□□□□□ -0.8
RPGR-210ENST00000494841 POTECB2RU33 542 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 ANP32CO43423 234 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 SNRPBP14678 240 aaKnown RBP10.06□□□□□ -0.8
RPGR-210ENST00000494841 RALBP1Q15311 655 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 MTFR1Q15390 333 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 USP21Q9UK80 565 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 PLCH1Q4KWH8 1693 aa10.06□□□□□ -0.8
RPGR-210ENST00000494841 A6NJY4 79 aa10.05□□□□□ -0.8
RPGR-210ENST00000494841 TNS4Q8IZW8 715 aa10.05□□□□□ -0.8
RPGR-210ENST00000494841 ANKRD24Q8TF21 1146 aa10.05□□□□□ -0.8
RPGR-210ENST00000494841 RGS17Q9UGC6 210 aaPredicted RBP10.05□□□□□ -0.8
RPGR-210ENST00000494841 IQSEC3Q9UPP2 1182 aaPredicted RBP10.05□□□□□ -0.8
RPGR-210ENST00000494841 USP3Q9Y6I4 520 aa10.05□□□□□ -0.8
RPGR-210ENST00000494841 LMO7Q8WWI1 1683 aa10.05□□□□□ -0.8
RPGR-210ENST00000494841 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 SLIT2O94813 1529 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 FIGNL2A6NMB9 653 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 FOXK2Q01167 660 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 UNC5CLQ8IV45 518 aa10.04□□□□□ -0.8
RPGR-210ENST00000494841 ZSCAN10Q96SZ4 725 aaPredicted RBP10.04□□□□□ -0.8
RPGR-210ENST00000494841 SCHIP1Q9P0W5 487 aaPredicted RBP10.04□□□□□ -0.8
RPGR-210ENST00000494841 RGPD2P0DJD1 1756 aa10.03□□□□□ -0.8
RPGR-210ENST00000494841 FLT4P35916 1363 aa10.03□□□□□ -0.8
RPGR-210ENST00000494841 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
RPGR-210ENST00000494841 CCDC184Q52MB2 194 aa10.03□□□□□ -0.8
RPGR-210ENST00000494841 ZNF295-AS1Q8N0V1 137 aa10.03□□□□□ -0.8
RPGR-210ENST00000494841 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
RPGR-210ENST00000494841 USP35Q9P2H5 1018 aa10.03□□□□□ -0.8
RPGR-210ENST00000494841 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
RPGR-210ENST00000494841 MYBBP1AQ9BQG0 1328 aaKnown RBP10.03□□□□□ -0.8
RPGR-210ENST00000494841 INSRP06213 1382 aa10.02□□□□□ -0.8
RPGR-210ENST00000494841 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.8
RPGR-210ENST00000494841 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 MAN1A2O60476 641 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.81
RPGR-210ENST00000494841 NBPF6Q5VWK0 638 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 TOM1L2Q6ZVM7 507 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 LYSMD3Q7Z3D4 306 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 RETREG2Q8NC44 543 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 NBPF4Q96M43 638 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 COL5A2P05997 1499 aaPredicted RBP10.02□□□□□ -0.81
RPGR-210ENST00000494841 NRAPQ86VF7 1730 aa10.02□□□□□ -0.81
RPGR-210ENST00000494841 SMG6Q86US8 1419 aaKnown RBP10.01□□□□□ -0.81
RPGR-210ENST00000494841 SPATA31C2B4DYI2 1134 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 LGR5O75473 907 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 IL13P35225 146 aa10.01□□□□□ -0.81
RPGR-210ENST00000494841 SWI5Q1ZZU3 235 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms