RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 R3HCC1Q9Y3T6 440 aaKnown RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 UBR1Q8IWV7 1749 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 SENP3-EIF4A1A0A087X0R7 540 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 CBLBQ13191 982 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 DNAJC2Q99543 621 aaKnown RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 GPC6Q9Y625 555 aaPredicted RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 LMNB1P20700 586 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 SRCIN1Q9C0H9 1055 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 ZNF395Q9H8N7 513 aaPredicted RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 TNS1Q9HBL0 1735 aaKnown RBP4.37□□□□□ -1.71
SNX13-209ENST00000492626 IDH3AP50213 366 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNX13-209ENST00000492626 TTC39BQ5VTQ0 682 aaPredicted RBP4.37□□□□□ -1.71
SNX13-209ENST00000492626 ETFBKMTQ8IXQ9 262 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 SPATA32Q96LK8 384 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 AGBL1Q96MI9 1066 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 TSEN34Q9BSV6 310 aaKnown RBP4.37□□□□□ -1.71
SNX13-209ENST00000492626 ZDHHC3Q9NYG2 299 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 TTF2Q9UNY4 1162 aaKnown RBP4.37□□□□□ -1.71
SNX13-209ENST00000492626 FMN1Q68DA7 1419 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 IGF1RP08069 1367 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 OPLAHO14841 1288 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 ZBTB39O15060 712 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 GPC1P35052 558 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 ORC1Q13415 861 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 PWP1Q13610 501 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 SLC43A3Q8NBI5 491 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 FAM8A1Q9UBU6 413 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 C10orf71Q711Q0 1435 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 CASZ1Q86V15 1759 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 ITGBL1O95965 494 aaPredicted RBP4.37□□□□□ -1.71
SNX13-209ENST00000492626 FANCCQ00597 558 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 PGBD3Q8N328 593 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 PMFBP1Q8TBY8 1022 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 PMEPA1Q969W9 287 aa4.37□□□□□ -1.71
SNX13-209ENST00000492626 PHF20L1A8MW92 1017 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 U2SURPO15042 1029 aaKnown RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 SSBP05455 408 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNX13-209ENST00000492626 NR3C2P08235 984 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 ZNF697Q5TEC3 545 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 PDE12Q6L8Q7 609 aaKnown RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 CEP63Q96MT8 703 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 IQSEC3Q9UPP2 1182 aaPredicted RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 CHD2O14647 1828 aaKnown RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 ADGRB3O60242 1522 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 PIK3R4Q99570 1358 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 POTEMA6NI47 508 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 PLA2G2CQ5R387 149 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 RELL1Q8IUW5 271 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 CKAP2LQ8IYA6 745 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 C12orf49Q9H741 205 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 TRAK1Q9UPV9 953 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 TAF1CQ15572 869 aaPredicted RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 IER5Q5VY09 327 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 NOP9Q86U38 636 aaKnown RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 SNIP1Q8TAD8 396 aaKnown RBP4.36□□□□□ -1.71
SNX13-209ENST00000492626 ARMC5Q96C12 935 aa4.36□□□□□ -1.71
SNX13-209ENST00000492626 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNX13-209ENST00000492626 ANKRD62A6NC57 917 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 SH3PXD2AQ5TCZ1 1133 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 DPH6Q7L8W6 267 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 ANKLE2Q86XL3 938 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 KRTAP3-2Q9BYR7 98 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 ACBD3Q9H3P7 528 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 USP3Q9Y6I4 520 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 SIAH2O43255 324 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 PHKA2P46019 1235 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 DHX38Q92620 1227 aaKnown RBP4.35□□□□□ -1.71
SNX13-209ENST00000492626 CCDC74AQ96AQ1 378 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 ITPKCQ96DU7 683 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 ZMYM3Q14202 1370 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 ANKRD13AQ8IZ07 590 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 THEMISQ8N1K5 641 aaPredicted RBP4.35□□□□□ -1.71
SNX13-209ENST00000492626 RNF166Q96A37 237 aaPredicted RBP4.35□□□□□ -1.71
SNX13-209ENST00000492626 ELP3Q9H9T3 547 aa4.35□□□□□ -1.71
SNX13-209ENST00000492626 ARHGAP35Q9NRY4 1499 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 NUP188Q5SRE5 1749 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 USP17L7P0C7H9 530 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 RLBP1P12271 317 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 SCARF1Q14162 830 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 LIAT1Q6ZQX7 453 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 ZDHHC1Q8WTX9 485 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 CPLX3Q8WVH0 158 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 FHDC1Q9C0D6 1143 aaPredicted RBP4.34□□□□□ -1.71
SNX13-209ENST00000492626 RTCBQ9Y3I0 505 aaKnown RBP4.34□□□□□ -1.71
SNX13-209ENST00000492626 WDR90Q96KV7 1748 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 BMP2P12643 396 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 EDN3P14138 238 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 TRERF1Q96PN7 1200 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 ZSWIM4Q9H7M6 989 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 CUEDC1Q9NWM3 386 aaPredicted RBP4.34□□□□□ -1.71
SNX13-209ENST00000492626 CARMIL1Q5VZK9 1371 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 ASXL1Q8IXJ9 1541 aa4.34□□□□□ -1.71
SNX13-209ENST00000492626 CES1P23141 567 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 GSTT1P30711 240 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 C4orf17Q53FE4 359 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 EFHC2Q5JST6 749 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 MRFAP1L1Q96HT8 127 aa4.34□□□□□ -1.72
SNX13-209ENST00000492626 SUSD3Q96L08 255 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms