RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PSMD1Q99460 953 aa9.62□□□□□ -0.87
CLDN1-202ENST00000490800 TAF1DQ9H5J8 278 aaPredicted RBP9.62□□□□□ -0.87
CLDN1-202ENST00000490800 TRMT112Q9UI30 125 aaKnown RBP9.62□□□□□ -0.87
CLDN1-202ENST00000490800 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
CLDN1-202ENST00000490800 NUP98P52948 1817 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 IQCA1LA6NCM1 817 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 ELL2O00472 640 aaPredicted RBP9.61□□□□□ -0.87
CLDN1-202ENST00000490800 PPEF1O14829 653 aaPredicted RBP9.61□□□□□ -0.87
CLDN1-202ENST00000490800 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
CLDN1-202ENST00000490800 TWISTNBQ3B726 338 aaPredicted RBP9.61□□□□□ -0.87
CLDN1-202ENST00000490800 FAM161AQ3B820 660 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 IFFO2Q5TF58 517 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.61□□□□□ -0.87
CLDN1-202ENST00000490800 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 BCL2L13Q9BXK5 485 aa9.61□□□□□ -0.87
CLDN1-202ENST00000490800 DBF4Q9UBU7 674 aaPredicted RBP9.61□□□□□ -0.87
CLDN1-202ENST00000490800 CACNA1SQ13698 1873 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 TIAM2Q8IVF5 1701 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 WDR90Q96KV7 1748 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 BBOX1O75936 387 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 HOXB7P09629 217 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 EIF6P56537 245 aaKnown RBP9.6□□□□□ -0.87
CLDN1-202ENST00000490800 ALDH1L2Q3SY69 923 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 EAPPQ56P03 285 aaPredicted RBP9.6□□□□□ -0.87
CLDN1-202ENST00000490800 C20orf194Q5TEA3 1177 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 LARGE2Q8N3Y3 721 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 PLBD2Q8NHP8 589 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 TMX4Q9H1E5 349 aaPredicted RBP9.6□□□□□ -0.87
CLDN1-202ENST00000490800 HACL1Q9UJ83 578 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 ATP6V0A2Q9Y487 856 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 GJA3Q9Y6H8 435 aa9.6□□□□□ -0.87
CLDN1-202ENST00000490800 ABCC4O15439 1325 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 RIC1Q4ADV7 1423 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 SNED1Q8TER0 1413 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 DICER1Q9UPY3 1922 aaKnown RBP9.59□□□□□ -0.87
CLDN1-202ENST00000490800 EPHX2P34913 555 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 POTEGQ6S5H5 508 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 DDX46Q7L014 1031 aaKnown RBP9.59□□□□□ -0.87
CLDN1-202ENST00000490800 LDHDQ86WU2 507 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 SP8Q8IXZ3 490 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 GPC2Q8N158 579 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 MRPL50Q8N5N7 158 aaKnown RBP9.59□□□□□ -0.87
CLDN1-202ENST00000490800 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 PHAXQ9H814 394 aaKnown RBP9.59□□□□□ -0.87
CLDN1-202ENST00000490800 SMC4Q9NTJ3 1288 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
CLDN1-202ENST00000490800 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
CLDN1-202ENST00000490800 PPIP5K2O43314 1243 aa9.58□□□□□ -0.88
CLDN1-202ENST00000490800 ITGBL1O95965 494 aaPredicted RBP9.58□□□□□ -0.88
CLDN1-202ENST00000490800 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
CLDN1-202ENST00000490800 EXOC6Q8TAG9 804 aa9.58□□□□□ -0.88
CLDN1-202ENST00000490800 CRBNQ96SW2 442 aa9.58□□□□□ -0.88
CLDN1-202ENST00000490800 GRAPQ13588 217 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 AOC3Q16853 763 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 MAP1SQ66K74 1059 aaPredicted RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 DPP8Q6V1X1 898 aaPredicted RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 RIC3Q7Z5B4 369 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 PNMA8AQ86V59 439 aaPredicted RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 NIM1KQ8IY84 436 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 MPNDQ8N594 471 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 FRAT1Q92837 279 aaPredicted RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 RTFDC1Q9BY42 306 aaPredicted RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 VPS33BQ9H267 617 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 NOB1Q9ULX3 412 aaKnown RBP9.57□□□□□ -0.88
CLDN1-202ENST00000490800 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
CLDN1-202ENST00000490800 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 COL4A5P29400 1685 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 COL9A1P20849 921 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 PTPREP23469 700 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 EPS15P42566 896 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 PRSS12P56730 875 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 MDM2Q00987 491 aaPredicted RBP9.56□□□□□ -0.88
CLDN1-202ENST00000490800 TRIM28Q13263 835 aaKnown RBP9.56□□□□□ -0.88
CLDN1-202ENST00000490800 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
CLDN1-202ENST00000490800 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 CNTROBQ8N137 903 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 SUPT20HQ8NEM7 779 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 PHOX2BQ99453 314 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 PCNTO95613 3336 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 KIF16BQ96L93 1317 aa9.56□□□□□ -0.88
CLDN1-202ENST00000490800 IRS4O14654 1257 aaPredicted RBP9.55□□□□□ -0.88
CLDN1-202ENST00000490800 RLBP1P12271 317 aa9.55□□□□□ -0.88
CLDN1-202ENST00000490800 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
CLDN1-202ENST00000490800 SCNN1DP51172 638 aa9.55□□□□□ -0.88
CLDN1-202ENST00000490800 CXCL9Q07325 125 aa9.55□□□□□ -0.88
CLDN1-202ENST00000490800 COL13A1Q5TAT6 717 aaPredicted RBP9.55□□□□□ -0.88
CLDN1-202ENST00000490800 NLRP7Q8WX94 980 aa9.55□□□□□ -0.88
CLDN1-202ENST00000490800 CELF1Q92879 486 aaKnown RBP9.55□□□□□ -0.88
CLDN1-202ENST00000490800 MYD88Q99836 296 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms