RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 CUL5Q93034 780 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 NAP1L4Q99733 375 aaKnown RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 STRN4Q9NRL3 753 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 SAMD15Q9P1V8 674 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 DBF4Q9UBU7 674 aaPredicted RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 DNAI1Q9UI46 699 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CNPY2Q9Y2B0 182 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 USH1CQ9Y6N9 552 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 HECW2Q9P2P5 1572 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 SMARCA5O60264 1052 aaPredicted RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZNF500O60304 480 aaPredicted RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 NEBLO76041 1014 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 UQCRFS1P1P0C7P4 283 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CALM1P0DP23 149 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CALM2P0DP24 149 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CALM3P0DP25 149 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 SSR1P43307 286 aaKnown RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC6Q16204 474 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CCDC38Q502W7 563 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 LRRC45Q96CN5 670 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 RPGRIP1Q96KN7 1286 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 VPS18Q9P253 973 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 TSKSQ9UJT2 592 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZCCHC11Q5TAX3 1644 aaKnown RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 N4BP3O15049 544 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 NOL3O60936 208 aaKnown RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 ALDH1L1O75891 902 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 SETDB1Q15047 1291 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 CAVIN4Q5BKX8 364 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 LMNTD2Q8IXW0 634 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 NAP1L3Q99457 506 aaPredicted RBP4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZNF652Q9Y2D9 606 aa4.22□□□□□ -1.73
RPS6KC1-204ENST00000490299 ATP2A1O14983 1001 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 ATP8B1O43520 1251 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 ALDH3A1P30838 453 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 PRIM1P49642 420 aaKnown RBP4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 NLRP5P59047 1200 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 ATP11AP98196 1134 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 PPP2R3AQ06190 1150 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 SEPT6Q14141 434 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 KLHL10Q6JEL2 608 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 GIMAP6Q6P9H5 292 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 PLCD3Q8N3E9 789 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 AOPEPQ8N6M6 819 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 ZNF526Q8TF50 670 aaPredicted RBP4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 VTI1AQ96AJ9 217 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 LRP2BPQ9P2M1 347 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 IKBKGQ9Y6K9 419 aa4.21□□□□□ -1.73
RPS6KC1-204ENST00000490299 ELP1O95163 1332 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 KDM2BQ8NHM5 1336 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 LRRC7Q96NW7 1537 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 KDM5CP41229 1560 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 MYO3AQ8NEV4 1616 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 PSMA7O14818 248 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 STARD3NLO95772 234 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 LIG1P18858 919 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 SDSP20132 328 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 FLIIQ13045 1269 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 CCDC96Q2M329 555 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 DNAJC21Q5F1R6 531 aaKnown RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 METTL24Q5JXM2 366 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 MRPL50Q8N5N7 158 aaKnown RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 ERMNQ8TAM6 284 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 TRIM47Q96LD4 638 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 LLPHQ9BRT6 129 aaKnown RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 PLCB1Q9NQ66 1216 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 ORC3Q9UBD5 711 aaPredicted RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 MTRF1LQ9UGC7 380 aaKnown RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 USP16Q9Y5T5 823 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 RNF123Q5XPI4 1314 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 DIP2AQ14689 1571 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 A0A1W2PRG0 241 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 TMCO5BA8MYB1 307 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 SSBP05455 408 aaKnown RBP eCLIP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 KIF5AQ12840 1032 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 VWA3BQ502W6 1294 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 CFAP58Q5T655 872 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 KRBA2Q6ZNG9 492 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 TNS4Q8IZW8 715 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 PPFIBP2Q8ND30 876 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 SMC6Q96SB8 1091 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 IFIT3O14879 490 aaKnown RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 PDE1AP54750 535 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 MTMR3Q13615 1198 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 RRAGBQ5VZM2 374 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 FCHSD1Q86WN1 690 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 CACNA2D3Q8IZS8 1091 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 CCDC114Q96M63 670 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 TEX13AQ9BXU3 409 aaPredicted RBP4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 CLSTN2Q9H4D0 955 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 CEP83Q9Y592 693 aa4.21□□□□□ -1.74
RPS6KC1-204ENST00000490299 TRPM2O94759 1503 aa4.2□□□□□ -1.74
RPS6KC1-204ENST00000490299 KIF3CO14782 793 aa4.2□□□□□ -1.74
RPS6KC1-204ENST00000490299 CIB2O75838 187 aa4.2□□□□□ -1.74
RPS6KC1-204ENST00000490299 GNAT2P19087 354 aa4.2□□□□□ -1.74
RPS6KC1-204ENST00000490299 GNAQP50148 359 aa4.2□□□□□ -1.74
RPS6KC1-204ENST00000490299 GSTO1P78417 241 aa4.2□□□□□ -1.74
RPS6KC1-204ENST00000490299 ATP8B2P98198 1209 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms