RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CNGA1P29973 690 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 UBE4AQ14139 1066 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 BICRAQ9NZM4 1560 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 SLU7O95391 586 aaKnown RBP10.03□□□□□ -0.8
LSAMP-205ENST00000490035 MPRIPQ6WCQ1 1025 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 MBIPQ9NS73 344 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 PARD3Q8TEW0 1356 aa10.03□□□□□ -0.8
LSAMP-205ENST00000490035 GAS8O95995 478 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 KRT2P35908 639 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 VAV2P52735 878 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 UBE3BQ7Z3V4 1068 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 ANKRD2Q9GZV1 360 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 COMMD10Q9Y6G5 202 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 PLCH2O75038 1416 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 SPDYE3A6NKU9 549 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 FLT4P35916 1363 aa10.02□□□□□ -0.8
LSAMP-205ENST00000490035 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.8
LSAMP-205ENST00000490035 PI4KAP2A4QPH2 592 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 SMARCA5O60264 1052 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 RFC4P35249 363 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 PRPF4BQ13523 1007 aaKnown RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 PI4KAP1Q8N8J0 262 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 PPP1R1BQ9UD71 204 aaPredicted RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 RTL1A6NKG5 1358 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 PDE1AP54750 535 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 RRAGBQ5VZM2 374 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 SMC6Q96SB8 1091 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 SAMM50Q9Y512 469 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 USH1CQ9Y6N9 552 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 ATP2B3Q16720 1220 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 WDR78Q5VTH9 848 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 FBF1Q8TES7 1133 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 RRP36Q96EU6 259 aaKnown RBP10.02□□□□□ -0.81
LSAMP-205ENST00000490035 SH2D4AQ9H788 454 aa10.02□□□□□ -0.81
LSAMP-205ENST00000490035 MACROD2A1Z1Q3 448 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 BICD1Q96G01 975 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 NUP58Q9BVL2 599 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 TNNC1P63316 161 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 IMPACTQ9P2X3 320 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 HOXB7P09629 217 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 DAAM2Q86T65 1068 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 C10orf67Q8IYJ2 551 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 NEK11Q8NG66 645 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC26Q8TAB7 109 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 NLRP3Q96P20 1036 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 ZKSCAN5Q9Y2L8 839 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 F13A1P00488 732 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 SKILP12757 684 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 SDSP20132 328 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 KIFAP3Q92845 792 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 HELLSQ9NRZ9 838 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 KLF18A0A0U1RQI7 1052 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 ANO6Q4KMQ2 910 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 B4GALNT4Q76KP1 1039 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 NME9Q86XW9 330 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
LSAMP-205ENST00000490035 RAB3IL1Q8TBN0 382 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 SPTLC2O15270 562 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 SMC5Q8IY18 1101 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 IQUBQ8NA54 791 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 SETDB2Q96T68 719 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 DTHD1Q6ZMT9 781 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
LSAMP-205ENST00000490035 KIF24Q5T7B8 1368 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.81
LSAMP-205ENST00000490035 LINS1Q8NG48 757 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 ELP1O95163 1332 aa10.01□□□□□ -0.81
LSAMP-205ENST00000490035 C6orf229H3BNL8 230 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 KRT79Q5XKE5 535 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC42Q96M95 316 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 PLCD1P51178 756 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 GUCY1B3Q02153 619 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 MCTP2Q6DN12 878 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 TRMT1Q9NXH9 659 aaKnown RBP10□□□□□ -0.81
LSAMP-205ENST00000490035 IDI1Q13907 227 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC65Q8IXS2 484 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 TRAPPC8Q9Y2L5 1435 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 EBAG9O00559 213 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 TMOD4Q9NZQ9 345 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 RBM8AQ9Y5S9 174 aaKnown RBP10□□□□□ -0.81
LSAMP-205ENST00000490035 NAA16Q6N069 864 aaPredicted RBP10□□□□□ -0.81
LSAMP-205ENST00000490035 ZMYM4Q5VZL5 1548 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 SYCP2Q9BX26 1530 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
LSAMP-205ENST00000490035 PAG1Q9NWQ8 432 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 TXNDC16Q9P2K2 825 aa10□□□□□ -0.81
LSAMP-205ENST00000490035 SYT1P21579 422 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 CBX1P83916 185 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms