RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-208ENST00000490033 CNTNAP3Q9BZ76 1288 aa4.71□□□□□ -1.66
C2orf88-208ENST00000490033 UBP1Q9NZI7 540 aa4.71□□□□□ -1.66
C2orf88-208ENST00000490033 ZFATQ9P243 1243 aa4.71□□□□□ -1.66
C2orf88-208ENST00000490033 STRIP2Q9ULQ0 834 aa4.71□□□□□ -1.66
C2orf88-208ENST00000490033 SUPT16HQ9Y5B9 1047 aaKnown RBP4.71□□□□□ -1.66
C2orf88-208ENST00000490033 MRPL42Q9Y6G3 142 aaKnown RBP4.71□□□□□ -1.66
C2orf88-208ENST00000490033 KLF4O43474 513 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 KIF4AO95239 1232 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 CELA3AP09093 270 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 FAM157BP0CG42 384 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 ACPPP15309 386 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 COL9A2Q14055 689 aaPredicted RBP4.7□□□□□ -1.66
C2orf88-208ENST00000490033 COL13A1Q5TAT6 717 aaPredicted RBP4.7□□□□□ -1.66
C2orf88-208ENST00000490033 NCAPG2Q86XI2 1143 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 GOLM1Q8NBJ4 401 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 CEP44Q9C0F1 390 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 ZFYVE1Q9HBF4 777 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 SIRPGQ9P1W8 387 aa4.7□□□□□ -1.66
C2orf88-208ENST00000490033 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
C2orf88-208ENST00000490033 TRPA1O75762 1119 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 PSAPP07602 524 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 BMP1P13497 986 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 ITPKAP23677 461 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 HSD3B2P26439 372 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 SOX18P35713 384 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 GRIA4P48058 902 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 LMNB2Q03252 620 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 HYAL2Q12891 473 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 CAMK2GQ13555 558 aaPredicted RBP4.69□□□□□ -1.66
C2orf88-208ENST00000490033 RAB33AQ14088 237 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 SPRED3Q2MJR0 410 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 SNAP47Q5SQN1 464 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 PCNX4Q63HM2 1172 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 FIGNL1Q6PIW4 674 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 CEP120Q8N960 986 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 CPLX3Q8WVH0 158 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 PNMA5Q96PV4 448 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 SRPK1Q96SB4 655 aaKnown RBP4.69□□□□□ -1.66
C2orf88-208ENST00000490033 TRIM55Q9BYV6 548 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 DZANK1Q9NVP4 752 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 TLR7Q9NYK1 1049 aaKnown RBP4.69□□□□□ -1.66
C2orf88-208ENST00000490033 PCDHGC4Q9Y5F7 938 aa4.69□□□□□ -1.66
C2orf88-208ENST00000490033 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.69□□□□□ -1.66
C2orf88-208ENST00000490033 SENP3-EIF4A1A0A087X0R7 540 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 DCDC2BA2VCK2 349 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 METTL12A8MUP2 240 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 ENC1O14682 589 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 KHNYNO15037 678 aaKnown RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 U2SURPO15042 1029 aaKnown RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 MAP3K6O95382 1288 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 THBS1P07996 1170 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 TFE3P19532 575 aaPredicted RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 NFKB1P19838 968 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 CRKP46108 304 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 TNP2Q05952 138 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 APOBRQ0VD83 1088 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 LBRQ14739 615 aaKnown RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 GRIN2CQ14957 1233 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 TTBK2Q6IQ55 1244 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 AGMOQ6ZNB7 445 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 TRIM46Q7Z4K8 759 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 SLITRK4Q8IW52 837 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 HNRNPLLQ8WVV9 542 aaKnown RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 NKD1Q969G9 470 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 ANAPC16Q96DE5 110 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 NECAB3Q96P71 396 aaPredicted RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 SRRTQ9BXP5 876 aaKnown RBP4.68□□□□□ -1.66
C2orf88-208ENST00000490033 STRN4Q9NRL3 753 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 DNMT3LQ9UJW3 386 aa4.68□□□□□ -1.66
C2orf88-208ENST00000490033 A0A096LPE4 126 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 A0A1W2PPZ6 126 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 PAGE1O75459 146 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 CLSTN1O94985 981 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 MAPTP10636 758 aaKnown RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 HOXD8P13378 290 aaPredicted RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 PLAURQ03405 335 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 SPEM2Q0P670 501 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 LAMC2Q13753 1193 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 UBAP2LQ14157 1087 aaKnown RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 FAM196AQ6ZSG2 479 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 NXPE3Q969Y0 559 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 GPATCH3Q96I76 525 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 RNPC3Q96LT9 517 aaKnown RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 ZFP42Q96MM3 310 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 NSUN5Q96P11 429 aaKnown RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 HHIPQ96QV1 700 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 BHLHE41Q9C0J9 482 aaPredicted RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 EFCC1Q9HA90 598 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 SEC31BQ9NQW1 1179 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 SNTG2Q9NY99 539 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 PRKAG3Q9UGI9 489 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 HCN2Q9UL51 889 aa4.67□□□□□ -1.66
C2orf88-208ENST00000490033 R3HCC1Q9Y3T6 440 aaKnown RBP4.67□□□□□ -1.66
C2orf88-208ENST00000490033 FAM221BA6H8Z2 402 aa4.66□□□□□ -1.66
C2orf88-208ENST00000490033 NFKBIEO00221 500 aa4.66□□□□□ -1.66
C2orf88-208ENST00000490033 ENPP3O14638 875 aa4.66□□□□□ -1.66
C2orf88-208ENST00000490033 SMAD7O15105 426 aaKnown RBP4.66□□□□□ -1.66
C2orf88-208ENST00000490033 BNIP3LO60238 219 aa4.66□□□□□ -1.66
C2orf88-208ENST00000490033 RPS26P62854 115 aaKnown RBP4.66□□□□□ -1.66
C2orf88-208ENST00000490033 RASA3Q14644 834 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms