RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-208ENST00000490033 CHIC1Q5VXU3 224 aa11.97□□□□□ -0.49
C2orf88-208ENST00000490033 AEBP2Q6ZN18 517 aaPredicted RBP11.81□□□□□ -0.52
C2orf88-208ENST00000490033 PHF23Q9BUL5 403 aaPredicted RBP10.6□□□□□ -0.71
C2orf88-208ENST00000490033 SENP3Q9H4L4 574 aaPredicted RBP9.92□□□□□ -0.82
C2orf88-208ENST00000490033 PLPPR3Q6T4P5 718 aa9.91□□□□□ -0.82
C2orf88-208ENST00000490033 ADRA2BP18089 450 aa9.3□□□□□ -0.92
C2orf88-208ENST00000490033 PPP6R1Q9UPN7 881 aa9.21□□□□□ -0.94
C2orf88-208ENST00000490033 FOXD1Q16676 465 aa9.17□□□□□ -0.94
C2orf88-208ENST00000490033 KCNA4P22459 653 aa9.13□□□□□ -0.95
C2orf88-208ENST00000490033 EHMT2Q96KQ7 1210 aa9.06□□□□□ -0.96
C2orf88-208ENST00000490033 PPP4R3CPQ6ZMV5 832 aa8.8□□□□□ -1
C2orf88-208ENST00000490033 SLC4A1APQ9BWU0 796 aaKnown RBP8.77□□□□□ -1.01
C2orf88-208ENST00000490033 PIAS4Q8N2W9 510 aaPredicted RBP8.75□□□□□ -1.01
C2orf88-208ENST00000490033 CSRNP3Q8WYN3 585 aa8.75□□□□□ -1.01
C2orf88-208ENST00000490033 NCBP3Q53F19 620 aaKnown RBP8.69□□□□□ -1.02
C2orf88-208ENST00000490033 NPM3O75607 178 aaKnown RBP8.58□□□□□ -1.04
C2orf88-208ENST00000490033 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
C2orf88-208ENST00000490033 ZBTB22O15209 634 aa8.42□□□□□ -1.06
C2orf88-208ENST00000490033 MSH5O43196 834 aa8.4□□□□□ -1.06
C2orf88-208ENST00000490033 SCAF1Q9H7N4 1312 aaKnown RBP8.39□□□□□ -1.07
C2orf88-208ENST00000490033 FOXD4L1Q9NU39 408 aa8.25□□□□□ -1.09
C2orf88-208ENST00000490033 DNAJC5BQ9UF47 199 aa8.25□□□□□ -1.09
C2orf88-208ENST00000490033 MAPK8IP2Q13387 824 aaPredicted RBP8.23□□□□□ -1.09
C2orf88-208ENST00000490033 RNF216Q9NWF9 866 aaPredicted RBP8.17□□□□□ -1.1
C2orf88-208ENST00000490033 HOXD11P31277 338 aaPredicted RBP8.01□□□□□ -1.13
C2orf88-208ENST00000490033 SLC4A2P04920 1241 aa8□□□□□ -1.13
C2orf88-208ENST00000490033 DMRT2Q9Y5R5 561 aa8□□□□□ -1.13
C2orf88-208ENST00000490033 RTN4Q9NQC3 1192 aaKnown RBP7.99□□□□□ -1.13
C2orf88-208ENST00000490033 AMER1Q5JTC6 1135 aaPredicted RBP7.97□□□□□ -1.13
C2orf88-208ENST00000490033 SLC24A1O60721 1099 aa7.96□□□□□ -1.14
C2orf88-208ENST00000490033 ATXN8OSP0DMR3 200 aa7.92□□□□□ -1.14
C2orf88-208ENST00000490033 MYCNP04198 464 aaPredicted RBP7.91□□□□□ -1.14
C2orf88-208ENST00000490033 FKBP8Q14318 412 aa7.87□□□□□ -1.15
C2orf88-208ENST00000490033 ATF5Q9Y2D1 282 aaPredicted RBP7.69□□□□□ -1.18
C2orf88-208ENST00000490033 DCAF8L1A6NGE4 600 aa7.68□□□□□ -1.18
C2orf88-208ENST00000490033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.64□□□□□ -1.19
C2orf88-208ENST00000490033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.61□□□□□ -1.19
C2orf88-208ENST00000490033 HNRNPUL2Q1KMD3 747 aaKnown RBP7.61□□□□□ -1.19
C2orf88-208ENST00000490033 SAMD1Q6SPF0 538 aaPredicted RBP7.61□□□□□ -1.19
C2orf88-208ENST00000490033 U3KPZ7 1027 aaPredicted RBP7.57□□□□□ -1.2
C2orf88-208ENST00000490033 ZNF219Q9P2Y4 722 aaPredicted RBP7.5□□□□□ -1.21
C2orf88-208ENST00000490033 FBXO3Q9UK99 471 aa7.44□□□□□ -1.22
C2orf88-208ENST00000490033 SPDYE4A6NLX3 237 aa7.42□□□□□ -1.22
C2orf88-208ENST00000490033 APLP2Q06481 763 aa7.41□□□□□ -1.22
C2orf88-208ENST00000490033 MKRN4PQ13434 485 aaPredicted RBP7.38□□□□□ -1.23
C2orf88-208ENST00000490033 PROM2Q8N271 834 aa7.37□□□□□ -1.23
C2orf88-208ENST00000490033 PLCB2Q00722 1185 aa7.35□□□□□ -1.23
C2orf88-208ENST00000490033 VASPP50552 380 aaPredicted RBP7.34□□□□□ -1.23
C2orf88-208ENST00000490033 POTEDQ86YR6 584 aa7.34□□□□□ -1.23
C2orf88-208ENST00000490033 FBLN2P98095 1184 aa7.31□□□□□ -1.24
C2orf88-208ENST00000490033 IFNLR1Q8IU57 520 aaPredicted RBP7.29□□□□□ -1.24
C2orf88-208ENST00000490033 DCAF8L2P0C7V8 631 aa7.25□□□□□ -1.25
C2orf88-208ENST00000490033 TRHP20396 242 aaPredicted RBP7.25□□□□□ -1.25
C2orf88-208ENST00000490033 HAP1P54257 671 aaPredicted RBP7.25□□□□□ -1.25
C2orf88-208ENST00000490033 POLA2Q14181 598 aa7.24□□□□□ -1.25
C2orf88-208ENST00000490033 SPINK5Q9NQ38 1064 aaPredicted RBP7.24□□□□□ -1.25
C2orf88-208ENST00000490033 PKD2Q13563 968 aa7.22□□□□□ -1.25
C2orf88-208ENST00000490033 RNF39Q9H2S5 420 aa7.18□□□□□ -1.26
C2orf88-208ENST00000490033 CAPN15O75808 1086 aa7.17□□□□□ -1.26
C2orf88-208ENST00000490033 VSIG10Q8N0Z9 540 aa7.15□□□□□ -1.26
C2orf88-208ENST00000490033 BCANQ96GW7 911 aa7.15□□□□□ -1.26
C2orf88-208ENST00000490033 C1QBPQ07021 282 aaKnown RBP7.14□□□□□ -1.27
C2orf88-208ENST00000490033 ZBTB12Q9Y330 459 aaPredicted RBP7.13□□□□□ -1.27
C2orf88-208ENST00000490033 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
C2orf88-208ENST00000490033 SPOCK2Q92563 424 aa7.11□□□□□ -1.27
C2orf88-208ENST00000490033 ECM2O94769 699 aaPredicted RBP7.09□□□□□ -1.27
C2orf88-208ENST00000490033 BBXQ8WY36 941 aaPredicted RBP7.09□□□□□ -1.27
C2orf88-208ENST00000490033 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.09□□□□□ -1.27
C2orf88-208ENST00000490033 ABCB7O75027 752 aa7.08□□□□□ -1.28
C2orf88-208ENST00000490033 PRKCSHP14314 528 aaPredicted RBP7.08□□□□□ -1.28
C2orf88-208ENST00000490033 NPM1P06748 294 aaKnown RBP eCLIP7.07□□□□□ -1.28
C2orf88-208ENST00000490033 STAG3Q9UJ98 1225 aa7.06□□□□□ -1.28
C2orf88-208ENST00000490033 TAOK2Q9UL54 1235 aa7.06□□□□□ -1.28
C2orf88-208ENST00000490033 PAXIP1Q6ZW49 1069 aaPredicted RBP7.05□□□□□ -1.28
C2orf88-208ENST00000490033 ZNF692Q9BU19 519 aaPredicted RBP7.05□□□□□ -1.28
C2orf88-208ENST00000490033 KDM2AQ9Y2K7 1162 aa7.05□□□□□ -1.28
C2orf88-208ENST00000490033 CFAP44Q96MT7 982 aa7.03□□□□□ -1.28
C2orf88-208ENST00000490033 PLCD3Q8N3E9 789 aa7.02□□□□□ -1.29
C2orf88-208ENST00000490033 RGL2O15211 777 aa7.01□□□□□ -1.29
C2orf88-208ENST00000490033 SPDYE2BA6NHP3 402 aa6.99□□□□□ -1.29
C2orf88-208ENST00000490033 SPDYE6P0CI01 402 aa6.99□□□□□ -1.29
C2orf88-208ENST00000490033 SPDYE2Q495Y8 402 aa6.99□□□□□ -1.29
C2orf88-208ENST00000490033 MIER1Q8N108 512 aa6.99□□□□□ -1.29
C2orf88-208ENST00000490033 SSUH2Q9Y2M2 353 aa6.99□□□□□ -1.29
C2orf88-208ENST00000490033 OSCARQ8IYS5 282 aa6.98□□□□□ -1.29
C2orf88-208ENST00000490033 CACNB1Q02641 598 aaPredicted RBP6.97□□□□□ -1.29
C2orf88-208ENST00000490033 PABPN1Q86U42 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
C2orf88-208ENST00000490033 SPRYD3Q8NCJ5 442 aa6.97□□□□□ -1.29
C2orf88-208ENST00000490033 TPRNQ4KMQ1 711 aa6.96□□□□□ -1.3
C2orf88-208ENST00000490033 DSG3P32926 999 aa6.95□□□□□ -1.3
C2orf88-208ENST00000490033 TSHZ2Q9NRE2 1034 aa6.95□□□□□ -1.3
C2orf88-208ENST00000490033 CIZ1Q9ULV3 898 aaPredicted RBP6.93□□□□□ -1.3
C2orf88-208ENST00000490033 CHGAP10645 457 aaKnown RBP6.92□□□□□ -1.3
C2orf88-208ENST00000490033 PLEKHG5O94827 1062 aa6.9□□□□□ -1.3
C2orf88-208ENST00000490033 ZBTB47Q9UFB7 747 aaPredicted RBP6.9□□□□□ -1.3
C2orf88-208ENST00000490033 TRIM41Q8WV44 630 aa6.86□□□□□ -1.31
C2orf88-208ENST00000490033 DNAJC5Q9H3Z4 198 aa6.85□□□□□ -1.31
C2orf88-208ENST00000490033 HS6ST3Q8IZP7 471 aa6.84□□□□□ -1.31
C2orf88-208ENST00000490033 RNF25Q96BH1 459 aaPredicted RBP6.81□□□□□ -1.32
C2orf88-208ENST00000490033 NBR1Q14596 966 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms