RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 UQCRFS1P1P0C7P4 283 aa24.22■■□□□ 1.47
ATP1A1-208ENST00000488733 SLC5A1P13866 664 aa24.22■■□□□ 1.47
ATP1A1-208ENST00000488733 NECTIN1Q15223 517 aa24.22■■□□□ 1.47
ATP1A1-208ENST00000488733 CIZ1Q9ULV3 898 aaPredicted RBP24.22■■□□□ 1.47
ATP1A1-208ENST00000488733 QSER1Q2KHR3 1735 aa24.22■■□□□ 1.47
ATP1A1-208ENST00000488733 KCNJ4P48050 445 aa24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 FKBP4Q02790 459 aaKnown RBP eCLIP24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 TNRC6CQ9HCJ0 1690 aaKnown RBP24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 RNF20Q5VTR2 975 aa24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 ANKRD18AQ8IVF6 992 aa24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 RBM8AQ9Y5S9 174 aaKnown RBP24.21■■□□□ 1.47
ATP1A1-208ENST00000488733 ZFYP08048 801 aaPredicted RBP24.2■■□□□ 1.46
ATP1A1-208ENST00000488733 NBR1Q14596 966 aa24.2■■□□□ 1.46
ATP1A1-208ENST00000488733 MSL1Q68DK7 614 aa24.2■■□□□ 1.46
ATP1A1-208ENST00000488733 RNF113AO15541 343 aaKnown RBP24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 TAF5LO75529 589 aa24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 MMP10P09238 476 aa24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 DDIT3P35638 169 aa24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 TM6SF1Q9BZW5 370 aa24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 CASZ1Q86V15 1759 aa24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 ARAP2Q8WZ64 1704 aa24.19■■□□□ 1.46
ATP1A1-208ENST00000488733 TTF1Q15361 905 aaPredicted RBP24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 ZMYM1Q5SVZ6 1142 aa24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 PRPF40BQ6NWY9 871 aaKnown RBP24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 ZNF589Q86UQ0 364 aaPredicted RBP24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 HELBQ8NG08 1087 aaPredicted RBP24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 BSDC1Q9NW68 430 aaPredicted RBP24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 ARID4AP29374 1257 aaPredicted RBP24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 CCDC102BQ68D86 513 aa24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 RASEFQ8IZ41 740 aa24.18■■□□□ 1.46
ATP1A1-208ENST00000488733 COL4A1P02462 1669 aa24.17■■□□□ 1.46
ATP1A1-208ENST00000488733 ZAP70P43403 619 aa24.17■■□□□ 1.46
ATP1A1-208ENST00000488733 NFKBIBQ15653 356 aa24.17■■□□□ 1.46
ATP1A1-208ENST00000488733 CREB3L3Q68CJ9 461 aa24.17■■□□□ 1.46
ATP1A1-208ENST00000488733 HMG20BQ9P0W2 317 aa24.17■■□□□ 1.46
ATP1A1-208ENST00000488733 PARP3Q9Y6F1 533 aa24.17■■□□□ 1.46
ATP1A1-208ENST00000488733 CHRNDQ07001 517 aa24.16■■□□□ 1.46
ATP1A1-208ENST00000488733 SCARF1Q14162 830 aa24.16■■□□□ 1.46
ATP1A1-208ENST00000488733 MCAMP43121 646 aa24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 ZSCAN25Q6NSZ9 544 aa24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 CELF1Q92879 486 aaKnown RBP24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 U3KPZ7 1027 aaPredicted RBP24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 UPF3BQ9BZI7 483 aaKnown RBP24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 NRXN2Q9P2S2 1712 aa24.15■■□□□ 1.46
ATP1A1-208ENST00000488733 SLC27A2O14975 620 aa24.14■■□□□ 1.45
ATP1A1-208ENST00000488733 PSMA5P28066 241 aa24.14■■□□□ 1.45
ATP1A1-208ENST00000488733 PHKA1P46020 1223 aa24.14■■□□□ 1.45
ATP1A1-208ENST00000488733 TSGA10IPQ3SY00 556 aa24.14■■□□□ 1.45
ATP1A1-208ENST00000488733 CRY2Q49AN0 593 aa24.14■■□□□ 1.45
ATP1A1-208ENST00000488733 CWC22Q9HCG8 908 aaKnown RBP24.14■■□□□ 1.45
ATP1A1-208ENST00000488733 RPS8P62241 208 aaKnown RBP24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 SEC62Q99442 399 aaKnown RBP24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 UBE4AQ14139 1066 aa24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 RPGRQ92834 1020 aaKnown RBP24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 UPF1Q92900 1129 aaKnown RBP eCLIP24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 TMX3Q96JJ7 454 aa24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 DSCC1Q9BVC3 393 aa24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 ZSWIM6Q9HCJ5 1215 aa24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 AKAP11Q9UKA4 1901 aa24.13■■□□□ 1.45
ATP1A1-208ENST00000488733 KRT32Q14532 448 aa24.12■■□□□ 1.45
ATP1A1-208ENST00000488733 PDGFDQ9GZP0 370 aaPredicted RBP24.12■■□□□ 1.45
ATP1A1-208ENST00000488733 CYP46A1Q9Y6A2 500 aa24.12■■□□□ 1.45
ATP1A1-208ENST00000488733 CASTP20810 708 aaKnown RBP24.11■■□□□ 1.45
ATP1A1-208ENST00000488733 JAKMIP1Q96N16 626 aaKnown RBP24.11■■□□□ 1.45
ATP1A1-208ENST00000488733 TTC14Q96N46 770 aa24.11■■□□□ 1.45
ATP1A1-208ENST00000488733 BRIP1Q9BX63 1249 aa24.11■■□□□ 1.45
ATP1A1-208ENST00000488733 KLRG2A4D1S0 409 aaPredicted RBP24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 CHGBP05060 677 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 CCDC129Q6ZRS4 1044 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 APPBP2Q92624 585 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 MINPP1Q9UNW1 487 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 TAF1P21675 1872 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 CYP2E1P05181 493 aaPredicted RBP24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 GRAPQ13588 217 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 CUL4AQ13619 759 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 VPS53Q5VIR6 699 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 GRAPLQ8TC17 118 aaPredicted RBP24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 FOXD4L1Q9NU39 408 aa24.1■■□□□ 1.45
ATP1A1-208ENST00000488733 MAST3O60307 1309 aa24.09■■□□□ 1.45
ATP1A1-208ENST00000488733 PI16Q6UXB8 463 aa24.09■■□□□ 1.45
ATP1A1-208ENST00000488733 RUFY3Q7L099 469 aa24.09■■□□□ 1.45
ATP1A1-208ENST00000488733 SPATA5Q8NB90 893 aa24.09■■□□□ 1.45
ATP1A1-208ENST00000488733 INTS4Q96HW7 963 aaKnown RBP24.09■■□□□ 1.45
ATP1A1-208ENST00000488733 ANKRD2Q9GZV1 360 aa24.09■■□□□ 1.45
ATP1A1-208ENST00000488733 WASHC4Q2M389 1173 aa24.08■■□□□ 1.45
ATP1A1-208ENST00000488733 RBM17Q96I25 401 aaKnown RBP24.08■■□□□ 1.45
ATP1A1-208ENST00000488733 RPAP1Q9BWH6 1393 aaPredicted RBP24.08■■□□□ 1.44
ATP1A1-208ENST00000488733 ADCK5Q3MIX3 580 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 SLC16A10Q8TF71 515 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 OSBP2Q969R2 916 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 PDRG1Q9NUG6 133 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 GNL3LQ9NVN8 582 aaKnown RBP24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 MYH7P12883 1935 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 HOXA10P31260 410 aaPredicted RBP24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 UBE3CQ15386 1083 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 LIMCH1Q9UPQ0 1083 aa24.07■■□□□ 1.44
ATP1A1-208ENST00000488733 ANKRD31Q8N7Z5 1873 aa24.06■■□□□ 1.44
ATP1A1-208ENST00000488733 SNAP23O00161 211 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms