RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 SLC27A2O14975 620 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
ABCA2-219ENST00000488535 DPCR1Q3MIW9 517 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 KLHDC4Q8TBB5 520 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 NAT10Q9H0A0 1025 aaKnown RBP15.24■□□□□ 0.03
ABCA2-219ENST00000488535 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
ABCA2-219ENST00000488535 E2F4Q16254 413 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 RNF20Q5VTR2 975 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 LEKR1Q6ZMV7 388 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 AK7Q96M32 723 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 PUF60Q9UHX1 559 aaKnown RBP15.24■□□□□ 0.03
ABCA2-219ENST00000488535 CFAP45Q9UL16 551 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 KDRP35968 1356 aa15.24■□□□□ 0.03
ABCA2-219ENST00000488535 ZNF335Q9H4Z2 1342 aaPredicted RBP15.24■□□□□ 0.03
ABCA2-219ENST00000488535 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 IBSPP21815 317 aaPredicted RBP15.23■□□□□ 0.03
ABCA2-219ENST00000488535 CREBRFQ8IUR6 639 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 KIF24Q5T7B8 1368 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 ERBB3P21860 1342 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 LOC102724159A0A0B4J2E5 919 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 PWP2Q15269 919 aaKnown RBP15.23■□□□□ 0.03
ABCA2-219ENST00000488535 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 PRDM11Q9NQV5 511 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 CWC15Q9P013 229 aaKnown RBP15.23■□□□□ 0.03
ABCA2-219ENST00000488535 A0A0D9SFI3 127 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 ARMCX5Q6P1M9 558 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 Q6ZUG5 572 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 MRFAP1L1Q96HT8 127 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 USP28Q96RU2 1077 aa15.23■□□□□ 0.03
ABCA2-219ENST00000488535 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
ABCA2-219ENST00000488535 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
ABCA2-219ENST00000488535 ATP1A3P13637 1013 aa15.22■□□□□ 0.03
ABCA2-219ENST00000488535 ECHDC1Q9NTX5 307 aa15.22■□□□□ 0.03
ABCA2-219ENST00000488535 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
ABCA2-219ENST00000488535 SASH3O75995 380 aa15.22■□□□□ 0.03
ABCA2-219ENST00000488535 DHX40Q8IX18 779 aaKnown RBP15.22■□□□□ 0.03
ABCA2-219ENST00000488535 TSPYL1Q9H0U9 437 aa15.22■□□□□ 0.03
ABCA2-219ENST00000488535 ARFGAP3Q9NP61 516 aa15.22■□□□□ 0.03
ABCA2-219ENST00000488535 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
ABCA2-219ENST00000488535 TULP2O00295 520 aa15.21■□□□□ 0.03
ABCA2-219ENST00000488535 MYL6BP14649 208 aa15.21■□□□□ 0.03
ABCA2-219ENST00000488535 H2AFXP16104 143 aaPredicted RBP15.21■□□□□ 0.03
ABCA2-219ENST00000488535 GSDMDP57764 484 aa15.21■□□□□ 0.03
ABCA2-219ENST00000488535 STK38Q15208 465 aa15.21■□□□□ 0.03
ABCA2-219ENST00000488535 GOLGA6L1Q8N7Z2 621 aa15.21■□□□□ 0.03
ABCA2-219ENST00000488535 DESI2Q9BSY9 194 aa15.21■□□□□ 0.03
ABCA2-219ENST00000488535 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 KIF2AO00139 706 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 AKAP4Q5JQC9 854 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 TOM1L2Q6ZVM7 507 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 ZNF589Q86UQ0 364 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 SRRTQ9BXP5 876 aaKnown RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 RRP15Q9Y3B9 282 aaKnown RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 TOPAZ1Q8N9V7 1692 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 DLG5Q8TDM6 1919 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 ETF1P62495 437 aaKnown RBP15.2■□□□□ 0.02
ABCA2-219ENST00000488535 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
ABCA2-219ENST00000488535 CASQ1P31415 396 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 FOXR1Q6PIV2 292 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 CPLX3Q8WVH0 158 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 RNMTO43148 476 aaKnown RBP15.19■□□□□ 0.02
ABCA2-219ENST00000488535 RPS6KB1P23443 525 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 MARCKSP29966 332 aaPredicted RBP15.19■□□□□ 0.02
ABCA2-219ENST00000488535 NRKQ7Z2Y5 1582 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 LZTFL1Q9NQ48 299 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 ADAM21Q9UKJ8 722 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 ELP1O95163 1332 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
ABCA2-219ENST00000488535 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 TOB2Q14106 344 aaPredicted RBP15.19■□□□□ 0.02
ABCA2-219ENST00000488535 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
ABCA2-219ENST00000488535 APPP05067 770 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
ABCA2-219ENST00000488535 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
ABCA2-219ENST00000488535 SLFNL1Q499Z3 407 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 CCDC12Q8WUD4 166 aaPredicted RBP15.18■□□□□ 0.02
ABCA2-219ENST00000488535 GDAP1L1Q96MZ0 367 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 SUGCTQ9HAC7 445 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 PDE11AQ9HCR9 933 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 UBASH3AP57075 661 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 EVA1CP58658 441 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 FAM193AP78312 1265 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.02
ABCA2-219ENST00000488535 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 NBPF11Q86T75 865 aa15.18■□□□□ 0.02
ABCA2-219ENST00000488535 IRX2Q9BZI1 471 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms