RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 USP17L3A6NCW0 530 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 USP17L4A6NCW7 530 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
SGIP1-212ENST00000487507 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
SGIP1-212ENST00000487507 HSP90AB3PQ58FF7 597 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 USP17L1Q7RTZ2 530 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
SGIP1-212ENST00000487507 ZBTB48P10074 688 aaPredicted RBP16.34■□□□□ 0.21
SGIP1-212ENST00000487507 PDIA6Q15084 440 aa16.34■□□□□ 0.21
SGIP1-212ENST00000487507 Q7L0L9 218 aa16.34■□□□□ 0.21
SGIP1-212ENST00000487507 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
SGIP1-212ENST00000487507 ALPK3Q96L96 1907 aa16.34■□□□□ 0.21
SGIP1-212ENST00000487507 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
SGIP1-212ENST00000487507 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
SGIP1-212ENST00000487507 RPS8P62241 208 aaKnown RBP16.33■□□□□ 0.2
SGIP1-212ENST00000487507 COPS6Q7L5N1 327 aa16.33■□□□□ 0.2
SGIP1-212ENST00000487507 OGFOD1Q8N543 542 aa16.33■□□□□ 0.2
SGIP1-212ENST00000487507 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
SGIP1-212ENST00000487507 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
SGIP1-212ENST00000487507 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
SGIP1-212ENST00000487507 PTPN18Q99952 460 aa16.33■□□□□ 0.2
SGIP1-212ENST00000487507 GJA5P36382 358 aa16.32■□□□□ 0.2
SGIP1-212ENST00000487507 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
SGIP1-212ENST00000487507 MTFR1Q15390 333 aa16.32■□□□□ 0.2
SGIP1-212ENST00000487507 APOBEC3FQ8IUX4 373 aaKnown RBP16.32■□□□□ 0.2
SGIP1-212ENST00000487507 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
SGIP1-212ENST00000487507 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
SGIP1-212ENST00000487507 SSC5DA1L4H1 1573 aa16.31■□□□□ 0.2
SGIP1-212ENST00000487507 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
SGIP1-212ENST00000487507 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
SGIP1-212ENST00000487507 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
SGIP1-212ENST00000487507 STAP2Q9UGK3 403 aa16.31■□□□□ 0.2
SGIP1-212ENST00000487507 ZBTB7BO15156 539 aaPredicted RBP16.3■□□□□ 0.2
SGIP1-212ENST00000487507 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
SGIP1-212ENST00000487507 CFAP53Q96M91 514 aa16.3■□□□□ 0.2
SGIP1-212ENST00000487507 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
SGIP1-212ENST00000487507 ATP5J2-PTCD1G3V325 749 aa16.29■□□□□ 0.2
SGIP1-212ENST00000487507 TAF1CQ15572 869 aaPredicted RBP16.29■□□□□ 0.2
SGIP1-212ENST00000487507 NUDCQ9Y266 331 aa16.29■□□□□ 0.2
SGIP1-212ENST00000487507 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
SGIP1-212ENST00000487507 CCDC85AQ96PX6 553 aaPredicted RBP16.28■□□□□ 0.2
SGIP1-212ENST00000487507 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.2
SGIP1-212ENST00000487507 DACT2Q5SW24 774 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 PODNQ7Z5L7 613 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 DEFB129Q9H1M3 183 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 ELP3Q9H9T3 547 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 ZFYVE28Q9HCC9 887 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
SGIP1-212ENST00000487507 A0A1W2PPC1 479 aa16.26■□□□□ 0.19
SGIP1-212ENST00000487507 IRS4O14654 1257 aaPredicted RBP16.26■□□□□ 0.19
SGIP1-212ENST00000487507 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.26■□□□□ 0.19
SGIP1-212ENST00000487507 EVI5O60447 810 aa16.25■□□□□ 0.19
SGIP1-212ENST00000487507 MAP3K11Q16584 847 aa16.25■□□□□ 0.19
SGIP1-212ENST00000487507 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
SGIP1-212ENST00000487507 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
SGIP1-212ENST00000487507 MGAMO43451 1857 aa16.25■□□□□ 0.19
SGIP1-212ENST00000487507 XDHP47989 1333 aa16.24■□□□□ 0.19
SGIP1-212ENST00000487507 COL1A1P02452 1464 aaPredicted RBP16.24■□□□□ 0.19
SGIP1-212ENST00000487507 KIF22Q14807 665 aa16.24■□□□□ 0.19
SGIP1-212ENST00000487507 ANKRD13DQ6ZTN6 518 aa16.24■□□□□ 0.19
SGIP1-212ENST00000487507 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
SGIP1-212ENST00000487507 CCL15-CCL14A0A0B4J2E2 113 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 TESPA1A2RU30 521 aaPredicted RBP16.23■□□□□ 0.19
SGIP1-212ENST00000487507 FARP2O94887 1054 aaPredicted RBP16.23■□□□□ 0.19
SGIP1-212ENST00000487507 CCL5P13501 91 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
SGIP1-212ENST00000487507 CCL15Q16663 113 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 NBPF12Q5TAG4 269 aaPredicted RBP16.23■□□□□ 0.19
SGIP1-212ENST00000487507 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
SGIP1-212ENST00000487507 PCDHAC2Q9Y5I4 1007 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 MYH3P11055 1940 aa16.23■□□□□ 0.19
SGIP1-212ENST00000487507 MYO3BQ8WXR4 1341 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 USP2O75604 605 aaPredicted RBP16.22■□□□□ 0.19
SGIP1-212ENST00000487507 ATP2B4P23634 1241 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 UBE2Q1Q7Z7E8 422 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 NKX2-3Q8TAU0 364 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
SGIP1-212ENST00000487507 GJA8P48165 433 aa16.21■□□□□ 0.19
SGIP1-212ENST00000487507 LACTBP83111 547 aaPredicted RBP16.21■□□□□ 0.19
SGIP1-212ENST00000487507 ANKRD13AQ8IZ07 590 aa16.21■□□□□ 0.19
SGIP1-212ENST00000487507 VEZTQ9HBM0 779 aa16.21■□□□□ 0.19
SGIP1-212ENST00000487507 NEFMP07197 916 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 DLGAP5Q15398 846 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 SUPT20HL1Q3ZLR7 823 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 STRIP1Q5VSL9 837 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
SGIP1-212ENST00000487507 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 PRDM6Q9NQX0 595 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 VCANP13611 3396 aa16.2■□□□□ 0.18
SGIP1-212ENST00000487507 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
SGIP1-212ENST00000487507 GJB1P08034 283 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms