RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PI16Q6UXB8 463 aa20.05■□□□□ 0.8
CTSA-207ENST00000484855 NLRP3Q96P20 1036 aa20.05■□□□□ 0.8
CTSA-207ENST00000484855 UQCRFS1P1P0C7P4 283 aa20.05■□□□□ 0.8
CTSA-207ENST00000484855 CASTP20810 708 aaKnown RBP20.05■□□□□ 0.8
CTSA-207ENST00000484855 PHKA1P46020 1223 aa20.05■□□□□ 0.8
CTSA-207ENST00000484855 TMX3Q96JJ7 454 aa20.05■□□□□ 0.8
CTSA-207ENST00000484855 JAKMIP1Q96N16 626 aaKnown RBP20.05■□□□□ 0.8
CTSA-207ENST00000484855 NPHP1O15259 732 aa20.04■□□□□ 0.8
CTSA-207ENST00000484855 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
CTSA-207ENST00000484855 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
CTSA-207ENST00000484855 ZFYP08048 801 aaPredicted RBP20.04■□□□□ 0.8
CTSA-207ENST00000484855 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
CTSA-207ENST00000484855 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
CTSA-207ENST00000484855 DOCK2Q92608 1830 aa20.03■□□□□ 0.8
CTSA-207ENST00000484855 MAST3O60307 1309 aa20.03■□□□□ 0.8
CTSA-207ENST00000484855 ADCK5Q3MIX3 580 aa20.03■□□□□ 0.8
CTSA-207ENST00000484855 TTC14Q96N46 770 aa20.03■□□□□ 0.8
CTSA-207ENST00000484855 SNAP23O00161 211 aa20.02■□□□□ 0.8
CTSA-207ENST00000484855 NFIXQ14938 502 aa20.02■□□□□ 0.8
CTSA-207ENST00000484855 TXNRD1Q16881 649 aa20.02■□□□□ 0.8
CTSA-207ENST00000484855 CCDC24Q8N4L8 307 aa20.02■□□□□ 0.8
CTSA-207ENST00000484855 BSDC1Q9NW68 430 aaPredicted RBP20.02■□□□□ 0.8
CTSA-207ENST00000484855 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
CTSA-207ENST00000484855 RPAP1Q9BWH6 1393 aaPredicted RBP20.02■□□□□ 0.8
CTSA-207ENST00000484855 TTF1Q15361 905 aaPredicted RBP20.02■□□□□ 0.8
CTSA-207ENST00000484855 HMGB2P26583 209 aaKnown RBP20.01■□□□□ 0.79
CTSA-207ENST00000484855 CELF1Q92879 486 aaKnown RBP20.01■□□□□ 0.79
CTSA-207ENST00000484855 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.01■□□□□ 0.79
CTSA-207ENST00000484855 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
CTSA-207ENST00000484855 CYP2E1P05181 493 aaPredicted RBP20.01■□□□□ 0.79
CTSA-207ENST00000484855 RXRBP28702 533 aa20.01■□□□□ 0.79
CTSA-207ENST00000484855 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
CTSA-207ENST00000484855 M0R2C6 588 aa20■□□□□ 0.79
CTSA-207ENST00000484855 CPA1P15085 419 aa20■□□□□ 0.79
CTSA-207ENST00000484855 PSMA5P28066 241 aa20■□□□□ 0.79
CTSA-207ENST00000484855 WASHC4Q2M389 1173 aa20■□□□□ 0.79
CTSA-207ENST00000484855 DSCC1Q9BVC3 393 aa20■□□□□ 0.79
CTSA-207ENST00000484855 CWC22Q9HCG8 908 aaKnown RBP20■□□□□ 0.79
CTSA-207ENST00000484855 LAMA4Q16363 1823 aa20■□□□□ 0.79
CTSA-207ENST00000484855 AK2P54819 239 aa20■□□□□ 0.79
CTSA-207ENST00000484855 CUL4AQ13619 759 aa20■□□□□ 0.79
CTSA-207ENST00000484855 RAB3GAP1Q15042 981 aa20■□□□□ 0.79
CTSA-207ENST00000484855 ZSCAN25Q6NSZ9 544 aa20■□□□□ 0.79
CTSA-207ENST00000484855 RUFY3Q7L099 469 aa20■□□□□ 0.79
CTSA-207ENST00000484855 ZGPATQ8N5A5 531 aaKnown RBP20■□□□□ 0.79
CTSA-207ENST00000484855 CNBD1Q8NA66 436 aa20■□□□□ 0.79
CTSA-207ENST00000484855 OSBP2Q969R2 916 aa20■□□□□ 0.79
CTSA-207ENST00000484855 GYS1P13807 737 aa19.99■□□□□ 0.79
CTSA-207ENST00000484855 TSGA10IPQ3SY00 556 aa19.99■□□□□ 0.79
CTSA-207ENST00000484855 PROM2Q8N271 834 aa19.99■□□□□ 0.79
CTSA-207ENST00000484855 APPBP2Q92624 585 aa19.99■□□□□ 0.79
CTSA-207ENST00000484855 PDRG1Q9NUG6 133 aa19.99■□□□□ 0.79
CTSA-207ENST00000484855 TNS1Q9HBL0 1735 aaKnown RBP19.99■□□□□ 0.79
CTSA-207ENST00000484855 VPS53Q5VIR6 699 aa19.98■□□□□ 0.79
CTSA-207ENST00000484855 SPATA5Q8NB90 893 aa19.98■□□□□ 0.79
CTSA-207ENST00000484855 PIH1D3Q9NQM4 214 aaKnown RBP19.98■□□□□ 0.79
CTSA-207ENST00000484855 MINPP1Q9UNW1 487 aa19.98■□□□□ 0.79
CTSA-207ENST00000484855 MYH13Q9UKX3 1938 aa19.98■□□□□ 0.79
CTSA-207ENST00000484855 RPS8P62241 208 aaKnown RBP19.98■□□□□ 0.79
CTSA-207ENST00000484855 RASGRF1Q13972 1273 aa19.98■□□□□ 0.79
CTSA-207ENST00000484855 KRT32Q14532 448 aa19.98■□□□□ 0.79
CTSA-207ENST00000484855 HSPD1P10809 573 aaKnown RBP19.97■□□□□ 0.79
CTSA-207ENST00000484855 TAF6LQ9Y6J9 622 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 PLSCR1O15162 318 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 IDH1O75874 414 aaKnown RBP19.97■□□□□ 0.79
CTSA-207ENST00000484855 APBA3O96018 575 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 ADD2P35612 726 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 BCAMP50895 628 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 UBE4AQ14139 1066 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
CTSA-207ENST00000484855 INTS4Q96HW7 963 aaKnown RBP19.97■□□□□ 0.79
CTSA-207ENST00000484855 TNPO1Q92973 898 aaKnown RBP19.96■□□□□ 0.79
CTSA-207ENST00000484855 LIMCH1Q9UPQ0 1083 aa19.96■□□□□ 0.79
CTSA-207ENST00000484855 CYP21A2P08686 494 aa19.95■□□□□ 0.78
CTSA-207ENST00000484855 SLC9C2Q5TAH2 1124 aa19.95■□□□□ 0.78
CTSA-207ENST00000484855 RGPD3A6NKT7 1758 aaPredicted RBP19.95■□□□□ 0.78
CTSA-207ENST00000484855 RGPD4Q7Z3J3 1758 aa19.95■□□□□ 0.78
CTSA-207ENST00000484855 NUCB2P80303 420 aa19.95■□□□□ 0.78
CTSA-207ENST00000484855 PRR5LQ6MZQ0 368 aa19.95■□□□□ 0.78
CTSA-207ENST00000484855 PUS7LQ9H0K6 701 aaKnown RBP19.95■□□□□ 0.78
CTSA-207ENST00000484855 TM4SF1P30408 202 aa19.94■□□□□ 0.78
CTSA-207ENST00000484855 RPS6KB1P23443 525 aa19.94■□□□□ 0.78
CTSA-207ENST00000484855 ST5P78524 1137 aa19.94■□□□□ 0.78
CTSA-207ENST00000484855 UBE3CQ15386 1083 aa19.94■□□□□ 0.78
CTSA-207ENST00000484855 PDE6AP16499 860 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 MCM4P33991 863 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 ANKRD2Q9GZV1 360 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 WWC3Q9ULE0 1092 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 ZNF804BA4D1E1 1349 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 GPAA1O43292 621 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 SERPINB2P05120 415 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 NEK1Q96PY6 1258 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 LARP6Q9BRS8 491 aaKnown RBP19.93■□□□□ 0.78
CTSA-207ENST00000484855 GNL3LQ9NVN8 582 aaKnown RBP19.93■□□□□ 0.78
CTSA-207ENST00000484855 TFCP2L1Q9NZI6 479 aa19.93■□□□□ 0.78
CTSA-207ENST00000484855 ZNF532Q9HCE3 1301 aa19.92■□□□□ 0.78
CTSA-207ENST00000484855 GYG1P46976 350 aa19.92■□□□□ 0.78
CTSA-207ENST00000484855 CAVIN4Q5BKX8 364 aa19.92■□□□□ 0.78
CTSA-207ENST00000484855 MAP3K12Q12852 859 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms