RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 DDIT3P35638 169 aa14.04□□□□□ -0.16
GGPS1-205ENST00000482013 KCNJ4P48050 445 aa14.04□□□□□ -0.16
GGPS1-205ENST00000482013 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
GGPS1-205ENST00000482013 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
GGPS1-205ENST00000482013 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
GGPS1-205ENST00000482013 APBA3O96018 575 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 HSP90AA1P07900 732 aaKnown RBP14.03□□□□□ -0.16
GGPS1-205ENST00000482013 MCAMP43121 646 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 ZAP70P43403 619 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 KRT32Q14532 448 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 CREB3L3Q68CJ9 461 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 CNBD1Q8NA66 436 aa14.03□□□□□ -0.16
GGPS1-205ENST00000482013 SLKQ9H2G2 1235 aaPredicted RBP14.03□□□□□ -0.16
GGPS1-205ENST00000482013 DOCK2Q92608 1830 aa14.02□□□□□ -0.16
GGPS1-205ENST00000482013 TNS1Q9HBL0 1735 aaKnown RBP14.02□□□□□ -0.16
GGPS1-205ENST00000482013 NPHP1O15259 732 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 PHKA1P46020 1223 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 SCARF1Q14162 830 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 PRPF40BQ6NWY9 871 aaKnown RBP14.02□□□□□ -0.17
GGPS1-205ENST00000482013 ZNF589Q86UQ0 364 aaPredicted RBP14.02□□□□□ -0.17
GGPS1-205ENST00000482013 RASEFQ8IZ41 740 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 HELBQ8NG08 1087 aaPredicted RBP14.02□□□□□ -0.17
GGPS1-205ENST00000482013 APPBP2Q92624 585 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 ALDH8A1Q9H2A2 487 aaPredicted RBP14.02□□□□□ -0.17
GGPS1-205ENST00000482013 ZSWIM6Q9HCJ5 1215 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 MINPP1Q9UNW1 487 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 NDUFB9Q9Y6M9 179 aa14.02□□□□□ -0.17
GGPS1-205ENST00000482013 TAF1P21675 1872 aa14.01□□□□□ -0.17
GGPS1-205ENST00000482013 SLC27A2O14975 620 aa14.01□□□□□ -0.17
GGPS1-205ENST00000482013 ST5P78524 1137 aa14.01□□□□□ -0.17
GGPS1-205ENST00000482013 UBE3CQ15386 1083 aa14.01□□□□□ -0.17
GGPS1-205ENST00000482013 INTS4Q96HW7 963 aaKnown RBP14.01□□□□□ -0.17
GGPS1-205ENST00000482013 TTC14Q96N46 770 aa14.01□□□□□ -0.17
GGPS1-205ENST00000482013 GNL3LQ9NVN8 582 aaKnown RBP14.01□□□□□ -0.17
GGPS1-205ENST00000482013 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
GGPS1-205ENST00000482013 ZNF804BA4D1E1 1349 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 SEMA3EO15041 775 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 IGSF3O75054 1194 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 SERPINB2P05120 415 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 CYP2E1P05181 493 aaPredicted RBP14□□□□□ -0.17
GGPS1-205ENST00000482013 CUL4AQ13619 759 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 VPS53Q5VIR6 699 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 NLGN1Q8N2Q7 840 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 SPATA5Q8NB90 893 aa14□□□□□ -0.17
GGPS1-205ENST00000482013 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
GGPS1-205ENST00000482013 RGS17Q9UGC6 210 aaPredicted RBP14□□□□□ -0.17
GGPS1-205ENST00000482013 RPAP1Q9BWH6 1393 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-205ENST00000482013 PDS5AQ29RF7 1337 aaKnown RBP13.99□□□□□ -0.17
GGPS1-205ENST00000482013 ADD2P35612 726 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 GRAPQ13588 217 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 CRY2Q49AN0 593 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 CAVIN4Q5BKX8 364 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 PRR5LQ6MZQ0 368 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-205ENST00000482013 RUFY3Q7L099 469 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-205ENST00000482013 TMX3Q96JJ7 454 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
GGPS1-205ENST00000482013 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
GGPS1-205ENST00000482013 TFCP2L1Q9NZI6 479 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 CTNNA3Q9UI47 895 aa13.99□□□□□ -0.17
GGPS1-205ENST00000482013 NRXN2Q9P2S2 1712 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 COL4A1P02462 1669 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 TNRC6CQ9HCJ0 1690 aaKnown RBP13.98□□□□□ -0.17
GGPS1-205ENST00000482013 MAST3O60307 1309 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
GGPS1-205ENST00000482013 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
GGPS1-205ENST00000482013 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
GGPS1-205ENST00000482013 MAP3K12Q12852 859 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 NFKBIBQ15653 356 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 OSBP2Q969R2 916 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 JAKMIP1Q96N16 626 aaKnown RBP13.98□□□□□ -0.17
GGPS1-205ENST00000482013 UPF3BQ9BZI7 483 aaKnown RBP13.98□□□□□ -0.17
GGPS1-205ENST00000482013 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
GGPS1-205ENST00000482013 MYO5AQ9Y4I1 1855 aaKnown RBP13.97□□□□□ -0.17
GGPS1-205ENST00000482013 POLRMTO00411 1230 aaKnown RBP13.97□□□□□ -0.17
GGPS1-205ENST00000482013 HSPD1P10809 573 aaKnown RBP13.97□□□□□ -0.17
GGPS1-205ENST00000482013 BCAMP50895 628 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 NUCB2P80303 420 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 RASGRF1Q13972 1273 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 WASHC4Q2M389 1173 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 POTEAQ6S8J7 498 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 FBXO33Q7Z6M2 555 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
GGPS1-205ENST00000482013 PIH1D3Q9NQM4 214 aaKnown RBP13.97□□□□□ -0.17
GGPS1-205ENST00000482013 SH2B1Q9NRF2 756 aaPredicted RBP13.97□□□□□ -0.17
GGPS1-205ENST00000482013 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 DENND2AQ9ULE3 1009 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 LEMD3Q9Y2U8 911 aa13.97□□□□□ -0.17
GGPS1-205ENST00000482013 QSER1Q2KHR3 1735 aa13.96□□□□□ -0.17
GGPS1-205ENST00000482013 BBOX1O75936 387 aa13.96□□□□□ -0.17
GGPS1-205ENST00000482013 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
GGPS1-205ENST00000482013 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.17
GGPS1-205ENST00000482013 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms