RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 PTGDRQ13258 359 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 HIC1Q14526 733 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 SH3D19Q5HYK7 790 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 CNTROBQ8N137 903 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 EPS8L1Q8TE68 723 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 PHF12Q96QT6 1004 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 TSPY26PQ9H489 355 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 CALCOCO1Q9P1Z2 691 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 NSFL1CQ9UNZ2 370 aaKnown RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 AK9Q5TCS8 1911 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 SOS1Q07889 1333 aaPredicted RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 CUL4AQ13619 759 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 NOM1Q5C9Z4 860 aaKnown RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 DNAJC14Q6Y2X3 702 aaPredicted RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 GPHNQ9NQX3 736 aaPredicted RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 CICQ96RK0 1608 aaPredicted RBP6.54□□□□□ -1.36
RTN1-206ENST00000481205 RAB11FIP3O75154 756 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 AP1G2O75843 785 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 MAP3K9P80192 1104 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 HS1BP3Q53T59 392 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 IFNL2Q8IZJ0 200 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 RHPN1Q8TCX5 695 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 KIF1BPQ96EK5 621 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 BORCS6Q96GS4 357 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 DIAPH3Q9NSV4 1193 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 DONSONQ9NYP3 566 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 CCDC39Q9UFE4 941 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 NWD2Q9ULI1 1742 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 MTA1Q13330 715 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 CWC27Q6UX04 472 aaKnown RBP6.54□□□□□ -1.36
RTN1-206ENST00000481205 EXOC8Q8IYI6 725 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 DDX54Q8TDD1 881 aaKnown RBP6.54□□□□□ -1.36
RTN1-206ENST00000481205 HLA-CQ95604 372 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 DBF4Q9UBU7 674 aaPredicted RBP6.54□□□□□ -1.36
RTN1-206ENST00000481205 STAP2Q9UGK3 403 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 SPG7Q9UQ90 795 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
RTN1-206ENST00000481205 N4BP2Q86UW6 1770 aaPredicted RBP6.54□□□□□ -1.36
RTN1-206ENST00000481205 CPDO75976 1380 aa6.54□□□□□ -1.36
RTN1-206ENST00000481205 C2orf72A6NCS6 295 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 HOXB7P09629 217 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 SERPINB4P48594 390 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 ATP2B3Q16720 1220 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 CTR9Q6PD62 1173 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 PLPP6Q8IY26 295 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 ITFG2Q969R8 447 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 NOL7Q9UMY1 257 aaKnown RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 PA2G4Q9UQ80 394 aaKnown RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 SMC3Q9UQE7 1217 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 PAPPAQ13219 1627 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 WDR17Q8IZU2 1322 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 SALL3Q9BXA9 1300 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 TBC1D12O60347 775 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 SSH3Q8TE77 659 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 RUFY2Q8WXA3 655 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 ZKSCAN5Q9Y2L8 839 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 C5P01031 1676 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 CACNA1FO60840 1977 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 AOX1Q06278 1338 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 FIBPO43427 364 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 KIF1CO43896 1103 aaKnown RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 IGKV5-2P06315 115 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 CALRP27797 417 aaKnown RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 HSPA4P34932 840 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 CLK2P49760 499 aaKnown RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 SASS6Q6UVJ0 657 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 COPS6Q7L5N1 327 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 USP48Q86UV5 1035 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 KAZALD1Q96I82 304 aa6.53□□□□□ -1.36
RTN1-206ENST00000481205 C9orf78Q9NZ63 289 aaPredicted RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 FEZ2Q9UHY8 353 aaPredicted RBP6.53□□□□□ -1.36
RTN1-206ENST00000481205 SCN11AQ9UI33 1791 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 PTCD1O75127 700 aaKnown RBP6.52□□□□□ -1.37
RTN1-206ENST00000481205 CABP4P57796 275 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 KSR2Q6VAB6 950 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 ANKRD23Q86SG2 305 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 STK32AQ8WU08 396 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.52□□□□□ -1.37
RTN1-206ENST00000481205 ATP6V1DQ9Y5K8 247 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 SGSM2O43147 1006 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 NRDCO43847 1150 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 GADD45BO75293 160 aaPredicted RBP6.52□□□□□ -1.37
RTN1-206ENST00000481205 IFIT2P09913 472 aaKnown RBP6.52□□□□□ -1.37
RTN1-206ENST00000481205 BIRC2Q13490 618 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 DNAJC21Q5F1R6 531 aaKnown RBP6.52□□□□□ -1.37
RTN1-206ENST00000481205 LRP10Q7Z4F1 713 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 SUCLG2Q96I99 432 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 PDLIM2Q96JY6 352 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 TMEM106CQ9BVX2 250 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 IL25Q9H293 177 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 BRMS1Q9HCU9 246 aa6.52□□□□□ -1.37
RTN1-206ENST00000481205 DDX21Q9NR30 783 aaKnown RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms