RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 PI16Q6UXB8 463 aa33.37■■■□□ 2.93
TNFRSF25-213ENST00000480393 JAKMIP1Q96N16 626 aaKnown RBP33.37■■■□□ 2.93
TNFRSF25-213ENST00000480393 TTF1Q15361 905 aaPredicted RBP33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 TXNRD1Q16881 649 aa33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 HMG20BQ9P0W2 317 aa33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 U3KPZ7 1027 aaPredicted RBP33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 COL4A1P02462 1669 aa33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 NFIXQ14938 502 aa33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 NOL8Q76FK4 1167 aaKnown RBP33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 TM6SF1Q9BZW5 370 aa33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 BSDC1Q9NW68 430 aaPredicted RBP33.36■■■□□ 2.93
TNFRSF25-213ENST00000480393 TMX3Q96JJ7 454 aa33.35■■■□□ 2.93
TNFRSF25-213ENST00000480393 FRAT2O75474 233 aaPredicted RBP33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 SLFNL1Q499Z3 407 aa33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 CCDC24Q8N4L8 307 aa33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 MAST3O60307 1309 aa33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 ZSCAN25Q6NSZ9 544 aa33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 CNBD1Q8NA66 436 aa33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 CYP46A1Q9Y6A2 500 aa33.33■■■□□ 2.93
TNFRSF25-213ENST00000480393 SNAP23O00161 211 aa33.32■■■□□ 2.92
TNFRSF25-213ENST00000480393 PSMA5P28066 241 aa33.32■■■□□ 2.92
TNFRSF25-213ENST00000480393 WASHC4Q2M389 1173 aa33.32■■■□□ 2.92
TNFRSF25-213ENST00000480393 ADCK5Q3MIX3 580 aa33.31■■■□□ 2.92
TNFRSF25-213ENST00000480393 CELF1Q92879 486 aaKnown RBP33.31■■■□□ 2.92
TNFRSF25-213ENST00000480393 AKAP11Q9UKA4 1901 aa33.31■■■□□ 2.92
TNFRSF25-213ENST00000480393 TTC14Q96N46 770 aa33.31■■■□□ 2.92
TNFRSF25-213ENST00000480393 CWC22Q9HCG8 908 aaKnown RBP33.31■■■□□ 2.92
TNFRSF25-213ENST00000480393 ZSWIM6Q9HCJ5 1215 aa33.31■■■□□ 2.92
TNFRSF25-213ENST00000480393 DSCC1Q9BVC3 393 aa33.3■■■□□ 2.92
TNFRSF25-213ENST00000480393 M0R2C6 588 aa33.29■■■□□ 2.92
TNFRSF25-213ENST00000480393 CYP2E1P05181 493 aaPredicted RBP33.29■■■□□ 2.92
TNFRSF25-213ENST00000480393 GYS1P13807 737 aa33.29■■■□□ 2.92
TNFRSF25-213ENST00000480393 PDRG1Q9NUG6 133 aa33.29■■■□□ 2.92
TNFRSF25-213ENST00000480393 RPAP1Q9BWH6 1393 aaPredicted RBP33.29■■■□□ 2.92
TNFRSF25-213ENST00000480393 APBA3O96018 575 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 RPS8P62241 208 aaKnown RBP33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 SPATA5Q8NB90 893 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 APPBP2Q92624 585 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 TNRC6CQ9HCJ0 1690 aaKnown RBP33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 A0A1B0GUL6 1792 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 AK2P54819 239 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 KRT32Q14532 448 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 PROM2Q8N271 834 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 OSBP2Q969R2 916 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 MINPP1Q9UNW1 487 aa33.28■■■□□ 2.92
TNFRSF25-213ENST00000480393 PLSCR1O15162 318 aa33.27■■■□□ 2.92
TNFRSF25-213ENST00000480393 CPA1P15085 419 aa33.27■■■□□ 2.92
TNFRSF25-213ENST00000480393 VPS53Q5VIR6 699 aa33.27■■■□□ 2.92
TNFRSF25-213ENST00000480393 RUFY3Q7L099 469 aa33.27■■■□□ 2.92
TNFRSF25-213ENST00000480393 PIH1D3Q9NQM4 214 aaKnown RBP33.27■■■□□ 2.92
TNFRSF25-213ENST00000480393 MYH7P12883 1935 aa33.27■■■□□ 2.92
TNFRSF25-213ENST00000480393 TAF1P21675 1872 aa33.26■■■□□ 2.92
TNFRSF25-213ENST00000480393 CUL4AQ13619 759 aa33.26■■■□□ 2.92
TNFRSF25-213ENST00000480393 UBE4AQ14139 1066 aa33.26■■■□□ 2.92
TNFRSF25-213ENST00000480393 TSGA10IPQ3SY00 556 aa33.26■■■□□ 2.92
TNFRSF25-213ENST00000480393 IDH1O75874 414 aaKnown RBP33.25■■■□□ 2.91
TNFRSF25-213ENST00000480393 BCAMP50895 628 aa33.25■■■□□ 2.91
TNFRSF25-213ENST00000480393 RASGRF1Q13972 1273 aa33.25■■■□□ 2.91
TNFRSF25-213ENST00000480393 RAB3GAP1Q15042 981 aa33.25■■■□□ 2.91
TNFRSF25-213ENST00000480393 ZGPATQ8N5A5 531 aaKnown RBP33.25■■■□□ 2.91
TNFRSF25-213ENST00000480393 BLOC1S2Q6QNY1 142 aa33.24■■■□□ 2.91
TNFRSF25-213ENST00000480393 LIMCH1Q9UPQ0 1083 aa33.24■■■□□ 2.91
TNFRSF25-213ENST00000480393 HSPD1P10809 573 aaKnown RBP33.23■■■□□ 2.91
TNFRSF25-213ENST00000480393 ADD2P35612 726 aa33.23■■■□□ 2.91
TNFRSF25-213ENST00000480393 ST5P78524 1137 aa33.23■■■□□ 2.91
TNFRSF25-213ENST00000480393 SLC9C2Q5TAH2 1124 aa33.23■■■□□ 2.91
TNFRSF25-213ENST00000480393 PRR5LQ6MZQ0 368 aa33.22■■■□□ 2.91
TNFRSF25-213ENST00000480393 INTS4Q96HW7 963 aaKnown RBP33.22■■■□□ 2.91
TNFRSF25-213ENST00000480393 ANKRD2Q9GZV1 360 aa33.22■■■□□ 2.91
TNFRSF25-213ENST00000480393 GNL3LQ9NVN8 582 aaKnown RBP33.22■■■□□ 2.91
TNFRSF25-213ENST00000480393 TFCP2L1Q9NZI6 479 aa33.22■■■□□ 2.91
TNFRSF25-213ENST00000480393 TAF6LQ9Y6J9 622 aa33.21■■■□□ 2.91
TNFRSF25-213ENST00000480393 SERPINB2P05120 415 aa33.2■■■□□ 2.91
TNFRSF25-213ENST00000480393 TM4SF1P30408 202 aa33.2■■■□□ 2.91
TNFRSF25-213ENST00000480393 NUCB2P80303 420 aa33.2■■■□□ 2.91
TNFRSF25-213ENST00000480393 UBE3CQ15386 1083 aa33.2■■■□□ 2.91
TNFRSF25-213ENST00000480393 CYP21A2P08686 494 aa33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 CAVIN4Q5BKX8 364 aa33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 TNPO1Q92973 898 aaKnown RBP33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 EP400Q96L91 3159 aa33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 PDE6AP16499 860 aa33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 RPS6KB1P23443 525 aa33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 MAP3K12Q12852 859 aa33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 PUS7LQ9H0K6 701 aaKnown RBP33.19■■■□□ 2.9
TNFRSF25-213ENST00000480393 ZNF827Q17R98 1081 aa33.18■■■□□ 2.9
TNFRSF25-213ENST00000480393 ZNF804BA4D1E1 1349 aa33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 ILDR1Q86SU0 546 aaPredicted RBP33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 VPS37DQ86XT2 251 aa33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 RPGRQ92834 1020 aaKnown RBP33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 NEK1Q96PY6 1258 aa33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 ZNF532Q9HCE3 1301 aa33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 CTNNA3Q9UI47 895 aa33.17■■■□□ 2.9
TNFRSF25-213ENST00000480393 GPAA1O43292 621 aa33.16■■■□□ 2.9
TNFRSF25-213ENST00000480393 GYG1P46976 350 aa33.16■■■□□ 2.9
TNFRSF25-213ENST00000480393 GRAPQ13588 217 aa33.16■■■□□ 2.9
TNFRSF25-213ENST00000480393 GRAPLQ8TC17 118 aaPredicted RBP33.16■■■□□ 2.9
TNFRSF25-213ENST00000480393 ZSCAN31Q96LW9 406 aaPredicted RBP33.16■■■□□ 2.9
TNFRSF25-213ENST00000480393 WWC3Q9ULE0 1092 aa33.16■■■□□ 2.9
TNFRSF25-213ENST00000480393 ANKRD1Q15327 319 aa33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms