RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ZBTB48P10074 688 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-217ENST00000478743 SLC10A4Q96EP9 437 aa16.3■□□□□ 0.2
HDAC8-217ENST00000478743 EYSQ5T1H1 3165 aa16.3■□□□□ 0.2
HDAC8-217ENST00000478743 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
HDAC8-217ENST00000478743 SPEF2Q9C093 1822 aa16.29■□□□□ 0.2
HDAC8-217ENST00000478743 INHBEP58166 350 aa16.29■□□□□ 0.2
HDAC8-217ENST00000478743 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
HDAC8-217ENST00000478743 DEFB123Q8N688 67 aa16.29■□□□□ 0.2
HDAC8-217ENST00000478743 G3V3G9 751 aa16.28■□□□□ 0.2
HDAC8-217ENST00000478743 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
HDAC8-217ENST00000478743 PODXL2Q9NZ53 605 aa16.28■□□□□ 0.2
HDAC8-217ENST00000478743 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
HDAC8-217ENST00000478743 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
HDAC8-217ENST00000478743 ERBB4Q15303 1308 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 USP17L3A6NCW0 530 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 USP17L4A6NCW7 530 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
HDAC8-217ENST00000478743 AIMP1Q12904 312 aaKnown RBP16.27■□□□□ 0.2
HDAC8-217ENST00000478743 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
HDAC8-217ENST00000478743 MAP3K11Q16584 847 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 RTL5Q5HYW3 569 aaPredicted RBP16.27■□□□□ 0.2
HDAC8-217ENST00000478743 USP17L1Q7RTZ2 530 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.2
HDAC8-217ENST00000478743 A0A1W2PPC1 479 aa16.26■□□□□ 0.19
HDAC8-217ENST00000478743 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
HDAC8-217ENST00000478743 DACT2Q5SW24 774 aa16.26■□□□□ 0.19
HDAC8-217ENST00000478743 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC8-217ENST00000478743 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
HDAC8-217ENST00000478743 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
HDAC8-217ENST00000478743 TESPA1A2RU30 521 aaPredicted RBP16.25■□□□□ 0.19
HDAC8-217ENST00000478743 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
HDAC8-217ENST00000478743 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
HDAC8-217ENST00000478743 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
HDAC8-217ENST00000478743 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
HDAC8-217ENST00000478743 PCDHAC2Q9Y5I4 1007 aa16.25■□□□□ 0.19
HDAC8-217ENST00000478743 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
HDAC8-217ENST00000478743 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
HDAC8-217ENST00000478743 PRDM6Q9NQX0 595 aa16.24■□□□□ 0.19
HDAC8-217ENST00000478743 ANKIB1Q9P2G1 1089 aa16.24■□□□□ 0.19
HDAC8-217ENST00000478743 RAPGEFL1Q9UHV5 662 aa16.24■□□□□ 0.19
HDAC8-217ENST00000478743 COL1A1P02452 1464 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-217ENST00000478743 AOX1Q06278 1338 aa16.23■□□□□ 0.19
HDAC8-217ENST00000478743 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
HDAC8-217ENST00000478743 CTGFP29279 349 aa16.23■□□□□ 0.19
HDAC8-217ENST00000478743 EIF4G2P78344 907 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDAC8-217ENST00000478743 APOBEC3FQ8IUX4 373 aaKnown RBP16.23■□□□□ 0.19
HDAC8-217ENST00000478743 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
HDAC8-217ENST00000478743 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
HDAC8-217ENST00000478743 MS4A4AQ96JQ5 239 aa16.23■□□□□ 0.19
HDAC8-217ENST00000478743 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
HDAC8-217ENST00000478743 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
HDAC8-217ENST00000478743 FBXW7Q969H0 707 aa16.22■□□□□ 0.19
HDAC8-217ENST00000478743 HTATIP2Q9BUP3 242 aa16.22■□□□□ 0.19
HDAC8-217ENST00000478743 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
HDAC8-217ENST00000478743 U2AF1L5P0DN76 240 aaPredicted RBP16.21■□□□□ 0.19
HDAC8-217ENST00000478743 U2AF1Q01081 240 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC8-217ENST00000478743 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
HDAC8-217ENST00000478743 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
HDAC8-217ENST00000478743 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
HDAC8-217ENST00000478743 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
HDAC8-217ENST00000478743 GJA8P48165 433 aa16.2■□□□□ 0.18
HDAC8-217ENST00000478743 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
HDAC8-217ENST00000478743 ELP3Q9H9T3 547 aa16.2■□□□□ 0.18
HDAC8-217ENST00000478743 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-217ENST00000478743 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-217ENST00000478743 NBPF12Q5TAG4 269 aaPredicted RBP16.19■□□□□ 0.18
HDAC8-217ENST00000478743 PODNQ7Z5L7 613 aa16.19■□□□□ 0.18
HDAC8-217ENST00000478743 KIAA0825Q8IV33 1275 aa16.19■□□□□ 0.18
HDAC8-217ENST00000478743 OPTNQ96CV9 577 aa16.19■□□□□ 0.18
HDAC8-217ENST00000478743 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-217ENST00000478743 USP2O75604 605 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-217ENST00000478743 CCL5P13501 91 aa16.18■□□□□ 0.18
HDAC8-217ENST00000478743 BCAMP50895 628 aa16.18■□□□□ 0.18
HDAC8-217ENST00000478743 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
HDAC8-217ENST00000478743 GDF15Q99988 308 aa16.18■□□□□ 0.18
HDAC8-217ENST00000478743 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
HDAC8-217ENST00000478743 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
HDAC8-217ENST00000478743 TXNRD3Q86VQ6 643 aa16.17■□□□□ 0.18
HDAC8-217ENST00000478743 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
HDAC8-217ENST00000478743 OGFOD1Q8N543 542 aa16.17■□□□□ 0.18
HDAC8-217ENST00000478743 ZFYVE28Q9HCC9 887 aa16.17■□□□□ 0.18
HDAC8-217ENST00000478743 XDHP47989 1333 aa16.17■□□□□ 0.18
HDAC8-217ENST00000478743 PRUNE2Q8WUY3 3088 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 CCL15-CCL14A0A0B4J2E2 113 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 GJB1P08034 283 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 COL9A1P20849 921 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 CCL15Q16663 113 aa16.16■□□□□ 0.18
HDAC8-217ENST00000478743 PPP1R12BO60237 982 aaPredicted RBP16.15■□□□□ 0.18
HDAC8-217ENST00000478743 EVI5O60447 810 aa16.15■□□□□ 0.18
HDAC8-217ENST00000478743 KLRK1P26718 216 aa16.15■□□□□ 0.18
HDAC8-217ENST00000478743 GUCD1Q96NT3 240 aa16.15■□□□□ 0.18
HDAC8-217ENST00000478743 MUC3AQ02505 3323 aa16.15■□□□□ 0.18
HDAC8-217ENST00000478743 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 ARHGEF6Q15052 776 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 KRT24Q2M2I5 525 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 STRIP1Q5VSL9 837 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms