RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 RGL2O15211 777 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NRDCO43847 1150 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 PTCD1O75127 700 aaKnown RBP9.82□□□□□ -0.84
PTPRD-209ENST00000477552 HSPD1P10809 573 aaKnown RBP9.82□□□□□ -0.84
PTPRD-209ENST00000477552 CDC25BP30305 580 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NT5C2P49902 561 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 RESTQ13127 1097 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NBPF14Q5TI25 921 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NBPF10Q6P3W6 841 aaKnown RBP9.82□□□□□ -0.84
PTPRD-209ENST00000477552 GIGYF2Q6Y7W6 1299 aaKnown RBP9.82□□□□□ -0.84
PTPRD-209ENST00000477552 CDC37L1Q7L3B6 337 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 TTC6Q86TZ1 520 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NECAB1Q8N987 351 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 RNF214Q8ND24 703 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 NCOA7Q8NI08 942 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 BICD2Q8TD16 824 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 KCNG4Q8TDN1 519 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 SPTLC3Q9NUV7 552 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 MAP3K15Q6ZN16 1313 aa9.82□□□□□ -0.84
PTPRD-209ENST00000477552 GOLGA6L19H0YKK7 550 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 MYO1BO43795 1136 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 YEATS4O95619 227 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 TUBB4AP04350 444 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 HCLS1P14317 486 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-209ENST00000477552 CPA1P15085 419 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 TPM4P67936 248 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 TYRO3Q06418 890 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 ST3GAL1Q11201 340 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 ZRSR1Q15695 479 aaKnown RBP9.81□□□□□ -0.84
PTPRD-209ENST00000477552 CHRNA2Q15822 529 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 DDX46Q7L014 1031 aaKnown RBP9.81□□□□□ -0.84
PTPRD-209ENST00000477552 RALYLQ86SE5 291 aaKnown RBP9.81□□□□□ -0.84
PTPRD-209ENST00000477552 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 TDRD7Q8NHU6 1098 aaKnown RBP9.81□□□□□ -0.84
PTPRD-209ENST00000477552 BRF1Q92994 677 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
PTPRD-209ENST00000477552 ANO10Q9NW15 660 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 TBC1D2BQ9UPU7 963 aa9.81□□□□□ -0.84
PTPRD-209ENST00000477552 ITGB4P16144 1822 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 ARAP2Q8WZ64 1704 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 E7EWF7 191 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 KINO60870 393 aaKnown RBP9.8□□□□□ -0.84
PTPRD-209ENST00000477552 GNAT2P19087 354 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 RCAN1P53805 252 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 UBE3CQ15386 1083 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 ALX1Q15699 326 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 STX1AQ16623 288 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 NSUN7Q8NE18 718 aaKnown RBP9.8□□□□□ -0.84
PTPRD-209ENST00000477552 KLHDC4Q8TBB5 520 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 WASF1Q92558 559 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 TMEM87BQ96K49 555 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 DACT1Q9NYF0 836 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 CICQ96RK0 1608 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-209ENST00000477552 MROH5Q6ZUA9 1318 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 SALL1Q9NSC2 1324 aa9.8□□□□□ -0.84
PTPRD-209ENST00000477552 DDX60Q8IY21 1712 aaKnown RBP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 ZNF213O14771 459 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 IL6STP40189 918 aaPredicted RBP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 NOLC1Q14978 699 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 DNTTIP2Q5QJE6 756 aaKnown RBP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 ADALQ6DHV7 355 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 TMTC2Q8N394 836 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 RTEL1Q9NZ71 1219 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRD-209ENST00000477552 MAST3O60307 1309 aa9.79□□□□□ -0.84
PTPRD-209ENST00000477552 NUP98P52948 1817 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 PTPDC1A2A3K4 754 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 KIF2AO00139 706 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-209ENST00000477552 CPLX1O14810 134 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 PDE8AO60658 829 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 PDIA3P30101 505 aaKnown RBP9.78□□□□□ -0.84
PTPRD-209ENST00000477552 GTF2F1P35269 517 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRD-209ENST00000477552 ZNF165P49910 485 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 TIMM10P62072 90 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 SCRN1Q12765 414 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 PARP10Q53GL7 1025 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 SYNE3Q6ZMZ3 975 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 TTLL7Q6ZT98 887 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 ELOA2Q8IYF1 753 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-209ENST00000477552 CEP57L1Q8IYX8 460 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 CABLES1Q8TDN4 633 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 CCDC34Q96HJ3 373 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 MRFAP1L1Q96HT8 127 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 BPIFA3Q9BQP9 254 aa9.78□□□□□ -0.84
PTPRD-209ENST00000477552 HOOK1Q9UJC3 728 aaKnown RBP9.78□□□□□ -0.84
PTPRD-209ENST00000477552 RTL9Q8NET4 1388 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms