RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 NECTIN1Q15223 517 aa24.6■■□□□ 1.53
ITGA4-207ENST00000476089 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.6■■□□□ 1.53
ITGA4-207ENST00000476089 ZMYM1Q5SVZ6 1142 aa24.59■■□□□ 1.53
ITGA4-207ENST00000476089 SERPINB2P05120 415 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 ZSCAN25Q6NSZ9 544 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 SEC62Q99442 399 aaKnown RBP24.58■■□□□ 1.53
ITGA4-207ENST00000476089 MINPP1Q9UNW1 487 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 TAF1P21675 1872 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 SNAP23O00161 211 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 TM4SF1P30408 202 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 UBE4AQ14139 1066 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 PRR5LQ6MZQ0 368 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 PI16Q6UXB8 463 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 RASEFQ8IZ41 740 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 FLAD1Q8NFF5 587 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 KCNB2Q92953 911 aa24.58■■□□□ 1.53
ITGA4-207ENST00000476089 AKAP11Q9UKA4 1901 aa24.57■■□□□ 1.52
ITGA4-207ENST00000476089 CHGBP05060 677 aa24.57■■□□□ 1.52
ITGA4-207ENST00000476089 CREB3L3Q68CJ9 461 aa24.57■■□□□ 1.52
ITGA4-207ENST00000476089 AKT1S1Q96B36 256 aa24.57■■□□□ 1.52
ITGA4-207ENST00000476089 UPF3BQ9BZI7 483 aaKnown RBP24.57■■□□□ 1.52
ITGA4-207ENST00000476089 ZNF827Q17R98 1081 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 CCDC129Q6ZRS4 1044 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 ANKRD2Q9GZV1 360 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 U3KPZ7 1027 aaPredicted RBP24.56■■□□□ 1.52
ITGA4-207ENST00000476089 COL4A1P02462 1669 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 WASHC4Q2M389 1173 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 CHMP5Q9NZZ3 219 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 HMG20BQ9P0W2 317 aa24.56■■□□□ 1.52
ITGA4-207ENST00000476089 CYP2E1P05181 493 aaPredicted RBP24.55■■□□□ 1.52
ITGA4-207ENST00000476089 SPATA5Q8NB90 893 aa24.55■■□□□ 1.52
ITGA4-207ENST00000476089 SLC27A2O14975 620 aa24.54■■□□□ 1.52
ITGA4-207ENST00000476089 TNS1Q9HBL0 1735 aaKnown RBP24.54■■□□□ 1.52
ITGA4-207ENST00000476089 TNRC6CQ9HCJ0 1690 aaKnown RBP24.54■■□□□ 1.52
ITGA4-207ENST00000476089 BCAMP50895 628 aa24.54■■□□□ 1.52
ITGA4-207ENST00000476089 NBR1Q14596 966 aa24.54■■□□□ 1.52
ITGA4-207ENST00000476089 CAVIN4Q5BKX8 364 aa24.54■■□□□ 1.52
ITGA4-207ENST00000476089 NLGN1Q8N2Q7 840 aa24.54■■□□□ 1.52
ITGA4-207ENST00000476089 RPGRQ92834 1020 aaKnown RBP24.54■■□□□ 1.52
ITGA4-207ENST00000476089 TM6SF1Q9BZW5 370 aa24.54■■□□□ 1.52
ITGA4-207ENST00000476089 GNL3LQ9NVN8 582 aaKnown RBP24.54■■□□□ 1.52
ITGA4-207ENST00000476089 CASTP20810 708 aaKnown RBP24.53■■□□□ 1.52
ITGA4-207ENST00000476089 PSMA5P28066 241 aa24.53■■□□□ 1.52
ITGA4-207ENST00000476089 SLFNL1Q499Z3 407 aa24.53■■□□□ 1.52
ITGA4-207ENST00000476089 APPBP2Q92624 585 aa24.53■■□□□ 1.52
ITGA4-207ENST00000476089 JAKMIP1Q96N16 626 aaKnown RBP24.53■■□□□ 1.52
ITGA4-207ENST00000476089 MAST3O60307 1309 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 GRAPQ13588 217 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 RASGRF1Q13972 1273 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 GRAPLQ8TC17 118 aaPredicted RBP24.52■■□□□ 1.52
ITGA4-207ENST00000476089 DSCC1Q9BVC3 393 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 FOXD4L1Q9NU39 408 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 MYH7P12883 1935 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 A0A1B0GUL6 1792 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 RGPD3A6NKT7 1758 aaPredicted RBP24.52■■□□□ 1.52
ITGA4-207ENST00000476089 RGPD4Q7Z3J3 1758 aa24.52■■□□□ 1.52
ITGA4-207ENST00000476089 POLRMTO00411 1230 aaKnown RBP24.51■■□□□ 1.51
ITGA4-207ENST00000476089 IDH1O75874 414 aaKnown RBP24.51■■□□□ 1.51
ITGA4-207ENST00000476089 VPS37DQ86XT2 251 aa24.51■■□□□ 1.51
ITGA4-207ENST00000476089 COL23A1Q86Y22 540 aaPredicted RBP24.51■■□□□ 1.51
ITGA4-207ENST00000476089 CYP46A1Q9Y6A2 500 aa24.51■■□□□ 1.51
ITGA4-207ENST00000476089 SLC9C2Q5TAH2 1124 aa24.51■■□□□ 1.51
ITGA4-207ENST00000476089 OSBP2Q969R2 916 aa24.51■■□□□ 1.51
ITGA4-207ENST00000476089 PIH1D3Q9NQM4 214 aaKnown RBP24.51■■□□□ 1.51
ITGA4-207ENST00000476089 CIZ1Q9ULV3 898 aaPredicted RBP24.51■■□□□ 1.51
ITGA4-207ENST00000476089 DDR1Q08345 913 aa24.5■■□□□ 1.51
ITGA4-207ENST00000476089 KRT32Q14532 448 aa24.5■■□□□ 1.51
ITGA4-207ENST00000476089 M0R2C6 588 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 ADD2P35612 726 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 ZSWIM6Q9HCJ5 1215 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 MAP3K12Q12852 859 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 ADCK5Q3MIX3 580 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 TSGA10IPQ3SY00 556 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 RBM17Q96I25 401 aaKnown RBP24.49■■□□□ 1.51
ITGA4-207ENST00000476089 TMX3Q96JJ7 454 aa24.49■■□□□ 1.51
ITGA4-207ENST00000476089 HSPD1P10809 573 aaKnown RBP24.48■■□□□ 1.51
ITGA4-207ENST00000476089 GYG1P46976 350 aa24.48■■□□□ 1.51
ITGA4-207ENST00000476089 UBE3CQ15386 1083 aa24.48■■□□□ 1.51
ITGA4-207ENST00000476089 CRY2Q49AN0 593 aa24.48■■□□□ 1.51
ITGA4-207ENST00000476089 ZNF804BA4D1E1 1349 aa24.48■■□□□ 1.51
ITGA4-207ENST00000476089 DDIT3P35638 169 aa24.47■■□□□ 1.51
ITGA4-207ENST00000476089 RUFY3Q7L099 469 aa24.47■■□□□ 1.51
ITGA4-207ENST00000476089 PDRG1Q9NUG6 133 aa24.47■■□□□ 1.51
ITGA4-207ENST00000476089 VPS53Q5VIR6 699 aa24.47■■□□□ 1.51
ITGA4-207ENST00000476089 NOL8Q76FK4 1167 aaKnown RBP24.47■■□□□ 1.51
ITGA4-207ENST00000476089 TTC14Q96N46 770 aa24.47■■□□□ 1.51
ITGA4-207ENST00000476089 CWC22Q9HCG8 908 aaKnown RBP24.47■■□□□ 1.51
ITGA4-207ENST00000476089 NFKBIBQ15653 356 aa24.46■■□□□ 1.51
ITGA4-207ENST00000476089 PUS7LQ9H0K6 701 aaKnown RBP24.46■■□□□ 1.51
ITGA4-207ENST00000476089 RPAP1Q9BWH6 1393 aaPredicted RBP24.46■■□□□ 1.51
ITGA4-207ENST00000476089 PDE6AP16499 860 aa24.45■■□□□ 1.5
ITGA4-207ENST00000476089 BLOC1S2Q6QNY1 142 aa24.45■■□□□ 1.5
ITGA4-207ENST00000476089 ANKIB1Q9P2G1 1089 aa24.45■■□□□ 1.5
ITGA4-207ENST00000476089 AK2P54819 239 aa24.45■■□□□ 1.5
ITGA4-207ENST00000476089 FAM84BQ96KN1 310 aaPredicted RBP24.45■■□□□ 1.5
ITGA4-207ENST00000476089 CTNNA3Q9UI47 895 aa24.45■■□□□ 1.5
ITGA4-207ENST00000476089 DENND2AQ9ULE3 1009 aa24.45■■□□□ 1.5
ITGA4-207ENST00000476089 ZNF532Q9HCE3 1301 aa24.44■■□□□ 1.5
ITGA4-207ENST00000476089 LRP2BPQ9P2M1 347 aa24.44■■□□□ 1.5
ITGA4-207ENST00000476089 PNPLA7Q6ZV29 1317 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms