RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 RNF20Q5VTR2 975 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 ZGPATQ8N5A5 531 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 ZSWIM6Q9HCJ5 1215 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 TAF6LQ9Y6J9 622 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 M0R2C6 588 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 AK2P54819 239 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 CUL4AQ13619 759 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 NFIXQ14938 502 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 NLRP3Q96P20 1036 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 CWC22Q9HCG8 908 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 PDRG1Q9NUG6 133 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 MAST3O60307 1309 aa11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 C4AP0C0L4 1744 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 CYP2E1P05181 493 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 ZFYP08048 801 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 RAB3GAP1Q15042 981 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 PIH1D3Q9NQM4 214 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 BSDC1Q9NW68 430 aaPredicted RBP11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 HMG20BQ9P0W2 317 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 PSMA5P28066 241 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 RUFY3Q7L099 469 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 PROM2Q8N271 834 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 AKAP11Q9UKA4 1901 aa11.75□□□□□ -0.53
SPTAN1-206ENST00000475367 NPHP1O15259 732 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 BCAMP50895 628 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 LIMCH1Q9UPQ0 1083 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 CARMIL3Q8ND23 1372 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 TAF1P21675 1872 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 ARAP2Q8WZ64 1704 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 MCM4P33991 863 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 RPS8P62241 208 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 COL9A3Q14050 684 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 SPATA5Q8NB90 893 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPTAN1-206ENST00000475367 WTIPA6NIX2 430 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-206ENST00000475367 HSPD1P10809 573 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-206ENST00000475367 GYS1P13807 737 aa11.73□□□□□ -0.53
SPTAN1-206ENST00000475367 RASGRF1Q13972 1273 aa11.73□□□□□ -0.53
SPTAN1-206ENST00000475367 APPBP2Q92624 585 aa11.73□□□□□ -0.53
SPTAN1-206ENST00000475367 UBR3Q6ZT12 1888 aa11.73□□□□□ -0.53
SPTAN1-206ENST00000475367 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 CYP21A2P08686 494 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 RXRBP28702 533 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 TM4SF1P30408 202 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 KRT32Q14532 448 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 SLC9C2Q5TAH2 1124 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 BLOC1S2Q6QNY1 142 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 CNBD1Q8NA66 436 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 INTS4Q96HW7 963 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 CASZ1Q86V15 1759 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 ADD2P35612 726 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 NUCB2P80303 420 aa11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 PUS7LQ9H0K6 701 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-206ENST00000475367 APBA3O96018 575 aa11.71□□□□□ -0.53
SPTAN1-206ENST00000475367 PDE6AP16499 860 aa11.71□□□□□ -0.53
SPTAN1-206ENST00000475367 UBE4AQ14139 1066 aa11.71□□□□□ -0.53
SPTAN1-206ENST00000475367 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.53
SPTAN1-206ENST00000475367 EP400Q96L91 3159 aa11.71□□□□□ -0.53
SPTAN1-206ENST00000475367 A0A0G2JLW4 131 aa11.71□□□□□ -0.54
SPTAN1-206ENST00000475367 GYG1P46976 350 aa11.71□□□□□ -0.54
SPTAN1-206ENST00000475367 PKP1Q13835 747 aa11.71□□□□□ -0.54
SPTAN1-206ENST00000475367 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.54
SPTAN1-206ENST00000475367 TCEANC2Q96MN5 208 aa11.71□□□□□ -0.54
SPTAN1-206ENST00000475367 LARGE1O95461 756 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 UBE3CQ15386 1083 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 STOX1Q6ZVD7 989 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 ZSCAN31Q96LW9 406 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 ALDH8A1Q9H2A2 487 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 MYH7P12883 1935 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 PLSCR1O15162 318 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 FOXP2O15409 715 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 GPAA1O43292 621 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 SERPINB2P05120 415 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 TTLL5Q6EMB2 1281 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 ANKRD2Q9GZV1 360 aa11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
SPTAN1-206ENST00000475367 TNRC6CQ9HCJ0 1690 aaKnown RBP11.69□□□□□ -0.54
SPTAN1-206ENST00000475367 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms