RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
DDX39B-217ENST00000474961 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
DDX39B-217ENST00000474961 COL4A1P02462 1669 aa11.78□□□□□ -0.52
DDX39B-217ENST00000474961 APBB1O00213 710 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 PTGER2P43116 358 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 OS9Q13438 667 aaPredicted RBP11.77□□□□□ -0.53
DDX39B-217ENST00000474961 CRY2Q49AN0 593 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 HSP90AB4PQ58FF6 505 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.53
DDX39B-217ENST00000474961 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
DDX39B-217ENST00000474961 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
DDX39B-217ENST00000474961 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.53
DDX39B-217ENST00000474961 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 PDZRN3Q9UPQ7 1066 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.53
DDX39B-217ENST00000474961 EYA2O00167 538 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 CIAO1O76071 339 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
DDX39B-217ENST00000474961 IGHMBP2P38935 993 aaKnown RBP11.76□□□□□ -0.53
DDX39B-217ENST00000474961 LRRC24Q50LG9 513 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 ATG9AQ7Z3C6 839 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
DDX39B-217ENST00000474961 A0A1B0GUL6 1792 aa11.76□□□□□ -0.53
DDX39B-217ENST00000474961 LRP5O75197 1615 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 DLEC1Q9Y238 1755 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-217ENST00000474961 SASH1O94885 1247 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 SRGNP10124 158 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 NPR1P16066 1061 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 IL15P40933 162 aaPredicted RBP11.75□□□□□ -0.53
DDX39B-217ENST00000474961 RPS8P62241 208 aaKnown RBP11.75□□□□□ -0.53
DDX39B-217ENST00000474961 NUCB1Q02818 461 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 DSG2Q14126 1118 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 C2CD5Q86YS7 1000 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 ANKRD18AQ8IVF6 992 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
DDX39B-217ENST00000474961 KIF1BPQ96EK5 621 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 CRAMP1Q96RY5 1269 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 MPHOSPH8Q99549 860 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 LRRCC1Q9C099 1032 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 RIPOR2Q9Y4F9 1068 aa11.75□□□□□ -0.53
DDX39B-217ENST00000474961 H0YIN7 160 aa11.74□□□□□ -0.53
DDX39B-217ENST00000474961 GRAPQ13588 217 aa11.74□□□□□ -0.53
DDX39B-217ENST00000474961 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
DDX39B-217ENST00000474961 GRAPLQ8TC17 118 aaPredicted RBP11.74□□□□□ -0.53
DDX39B-217ENST00000474961 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
DDX39B-217ENST00000474961 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
DDX39B-217ENST00000474961 CHRNA5P30532 468 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 TFCP2Q12800 502 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.531e-13■■□□□ 11.7
DDX39B-217ENST00000474961 LNPKQ9C0E8 428 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 IL1RAPL2Q9NP60 686 aa11.73□□□□□ -0.53
DDX39B-217ENST00000474961 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-217ENST00000474961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
DDX39B-217ENST00000474961 TBC1D12O60347 775 aa11.72□□□□□ -0.53
DDX39B-217ENST00000474961 BBOX1O75936 387 aa11.72□□□□□ -0.53
DDX39B-217ENST00000474961 ALDH1B1P30837 517 aa11.72□□□□□ -0.53
DDX39B-217ENST00000474961 MFSD10Q14728 455 aa11.72□□□□□ -0.53
DDX39B-217ENST00000474961 METTL24Q5JXM2 366 aa11.72□□□□□ -0.53
DDX39B-217ENST00000474961 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
DDX39B-217ENST00000474961 MROH5Q6ZUA9 1318 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-217ENST00000474961 DPEP1P16444 411 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 TGFB2P61812 414 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 C16orf71Q8IYS4 520 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-217ENST00000474961 HELBQ8NG08 1087 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-217ENST00000474961 MINPP1Q9UNW1 487 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 CD2APQ9Y5K6 639 aa11.71□□□□□ -0.53
DDX39B-217ENST00000474961 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
DDX39B-217ENST00000474961 LRRC37AA6NMS7 1700 aa11.71□□□□□ -0.54
DDX39B-217ENST00000474961 PPEF1O14829 653 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-217ENST00000474961 SLC34A2O95436 690 aa11.7□□□□□ -0.54
DDX39B-217ENST00000474961 KCNA3P22001 575 aa11.7□□□□□ -0.54
DDX39B-217ENST00000474961 CHRNDQ07001 517 aa11.7□□□□□ -0.54
DDX39B-217ENST00000474961 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
DDX39B-217ENST00000474961 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
DDX39B-217ENST00000474961 CNKSR1Q969H4 720 aa11.7□□□□□ -0.54
DDX39B-217ENST00000474961 GPR108Q9NPR9 543 aa11.7□□□□□ -0.54
DDX39B-217ENST00000474961 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-217ENST00000474961 ST18O60284 1047 aa11.69□□□□□ -0.54
DDX39B-217ENST00000474961 TAF5LO75529 589 aa11.69□□□□□ -0.54
DDX39B-217ENST00000474961 PDE8BO95263 885 aa11.69□□□□□ -0.54
DDX39B-217ENST00000474961 TNNI3KQ59H18 835 aa11.69□□□□□ -0.54
DDX39B-217ENST00000474961 TMC4Q7Z404 712 aa11.69□□□□□ -0.54
DDX39B-217ENST00000474961 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
DDX39B-217ENST00000474961 AACSQ86V21 672 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms