RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 DUOXA2Q1HG44 320 aa7.51□□□□□ -1.21
TMEM50B-208ENST00000474272 CACTIN-AS1Q8N1I8 211 aa7.51□□□□□ -1.21
TMEM50B-208ENST00000474272 FOXD4L4Q8WXT5 416 aaPredicted RBP7.51□□□□□ -1.21
TMEM50B-208ENST00000474272 ZNF438Q7Z4V0 828 aa7.5□□□□□ -1.21
TMEM50B-208ENST00000474272 KRTAP1-3Q8IUG1 177 aa7.5□□□□□ -1.21
TMEM50B-208ENST00000474272 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
TMEM50B-208ENST00000474272 C1orf127Q8N9H9 656 aa7.5□□□□□ -1.21
TMEM50B-208ENST00000474272 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
TMEM50B-208ENST00000474272 GGNBP2Q9H3C7 697 aa7.5□□□□□ -1.21
TMEM50B-208ENST00000474272 HMX2A2RU54 273 aa7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 DHX15O43143 795 aaKnown RBP7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 DNM1Q05193 864 aaKnown RBP7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 TRIM42Q8IWZ5 723 aa7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 DCAF11Q8TEB1 546 aa7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 EDEM1Q92611 657 aa7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 UTP4Q969X6 686 aaKnown RBP7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 KRTAP4-12Q9BQ66 201 aa7.49□□□□□ -1.21
TMEM50B-208ENST00000474272 PTPRAP18433 802 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 CD97P48960 835 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 HGSNATQ68CP4 663 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 FAM117BQ6P1L5 589 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 PBXIP1Q96AQ6 731 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 C7orf69Q9H7B7 122 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 SEC31BQ9NQW1 1179 aa7.48□□□□□ -1.21
TMEM50B-208ENST00000474272 ARID3CA6NKF2 412 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 NLRP12P59046 1061 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 PDE12Q6L8Q7 609 aaKnown RBP7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 KLHL23Q8NBE8 558 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 SLC7A3Q8WY07 619 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 FAM46AQ96IP4 442 aaKnown RBP7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 CEP41Q9BYV8 373 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 ZMYND15Q9H091 742 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 SALL4Q9UJQ4 1053 aa7.47□□□□□ -1.21
TMEM50B-208ENST00000474272 NFKBIEO00221 500 aa7.46□□□□□ -1.22
TMEM50B-208ENST00000474272 CES1P23141 567 aa7.46□□□□□ -1.22
TMEM50B-208ENST00000474272 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
TMEM50B-208ENST00000474272 SLC51AQ86UW1 340 aa7.46□□□□□ -1.22
TMEM50B-208ENST00000474272 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
TMEM50B-208ENST00000474272 FAM177BA6PVY3 158 aa7.45□□□□□ -1.22
TMEM50B-208ENST00000474272 ADAMTS4O75173 837 aa7.45□□□□□ -1.22
TMEM50B-208ENST00000474272 NFIAQ12857 509 aa7.45□□□□□ -1.22
TMEM50B-208ENST00000474272 ZDHHC13Q8IUH4 622 aa7.45□□□□□ -1.22
TMEM50B-208ENST00000474272 DZANK1Q9NVP4 752 aa7.45□□□□□ -1.22
TMEM50B-208ENST00000474272 H3BRJ5 948 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 PDGFAP04085 211 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 BMP3P12645 472 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 PREPP48147 710 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 LCE3BQ5TA77 95 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 CCDC97Q96F63 343 aaPredicted RBP7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 MYRFLQ96LU7 910 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 CHRDQ9H2X0 955 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 KCNF1Q9H3M0 494 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 GTF3C3Q9Y5Q9 886 aa7.44□□□□□ -1.22
TMEM50B-208ENST00000474272 PDE2AO00408 941 aaPredicted RBP7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 GSC2O15499 205 aa7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 SART1O43290 800 aaKnown RBP7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 COBLO75128 1261 aa7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 MPSTP25325 297 aa7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 NOM1Q5C9Z4 860 aaKnown RBP7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 RNF43Q68DV7 783 aa7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 HELQQ8TDG4 1101 aa7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 OAS3Q9Y6K5 1087 aaKnown RBP7.43□□□□□ -1.22
TMEM50B-208ENST00000474272 EIF1AXP47813 144 aaKnown RBP7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 CABP4P57796 275 aa7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 PIP4K2BP78356 416 aa7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 XKR5Q6UX68 686 aa7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 BEND4Q6ZU67 534 aa7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 FAM20CQ8IXL6 584 aa7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 GTF3C2Q8WUA4 911 aaPredicted RBP7.42□□□□□ -1.22
TMEM50B-208ENST00000474272 PRR19A6NJB7 356 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 EREGO14944 169 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 UVSSAQ2YD98 709 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 TTC16Q8NEE8 873 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 OSMRQ99650 979 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 POLIQ9UNA4 740 aa7.41□□□□□ -1.22
TMEM50B-208ENST00000474272 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 KIAA1324LA8MWY0 1029 aaPredicted RBP7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 SOX1O00570 391 aaPredicted RBP7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 PCSK2P16519 638 aa7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 SHKBP1Q8TBC3 707 aa7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 FAM83CQ9BQN1 747 aa7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 SOX13Q9UN79 622 aa7.4□□□□□ -1.22
TMEM50B-208ENST00000474272 COL17A1Q9UMD9 1497 aaPredicted RBP7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 RPLP1P05386 114 aaKnown RBP7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 MZF1P28698 734 aaPredicted RBP7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 AAMPQ13685 434 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 FDX2Q6P4F2 183 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 CLEC10AQ8IUN9 316 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 NXPE3Q969Y0 559 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 DBNDD2Q9BQY9 259 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 ZKSCAN3Q9BRR0 538 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
TMEM50B-208ENST00000474272 OSGEPQ9NPF4 335 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms