RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PCMTD2Q9NV79 361 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 SALL4Q9UJQ4 1053 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 OAS3Q9Y6K5 1087 aaKnown RBP4.3□□□□□ -1.72
COMMD3-209ENST00000471350 CDC27P30260 824 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 HYAL2Q12891 473 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 HGSNATQ68CP4 663 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 ACAD11Q709F0 780 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 ATCAYQ86WG3 371 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 TRIM42Q8IWZ5 723 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 PIK3R5Q8WYR1 880 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 HHIPQ96QV1 700 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 ZMYND15Q9H091 742 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 RBSNQ9H1K0 784 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 C7orf69Q9H7B7 122 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 ABI2Q9NYB9 513 aaPredicted RBP4.29□□□□□ -1.72
COMMD3-209ENST00000471350 STIM2Q9P246 746 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 SEPT3Q9UH03 358 aa4.29□□□□□ -1.72
COMMD3-209ENST00000471350 HMX2A2RU54 273 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 SCNN1AP37088 669 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 NFIAQ12857 509 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 UVSSAQ2YD98 709 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 XKR5Q6UX68 686 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 DTX1Q86Y01 620 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 KLHL23Q8NBE8 558 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 CHRDQ9H2X0 955 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 FAM13BQ9NYF5 915 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 KANSL3Q9P2N6 904 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 STOML1Q9UBI4 398 aa4.28□□□□□ -1.72
COMMD3-209ENST00000471350 DHX15O43143 795 aaKnown RBP4.27□□□□□ -1.73
COMMD3-209ENST00000471350 PTCD1O75127 700 aaKnown RBP4.27□□□□□ -1.73
COMMD3-209ENST00000471350 TRPA1O75762 1119 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 SMNDC1O75940 238 aaKnown RBP eCLIP4.27□□□□□ -1.73
COMMD3-209ENST00000471350 CDC25BP30305 580 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 PREPP48147 710 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 RNF43Q68DV7 783 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 PDE12Q6L8Q7 609 aaKnown RBP4.27□□□□□ -1.73
COMMD3-209ENST00000471350 NFXL1Q6ZNB6 911 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.27□□□□□ -1.73
COMMD3-209ENST00000471350 FAM20CQ8IXL6 584 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 C1orf127Q8N9H9 656 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 DCAF11Q8TEB1 546 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 NUDT16Q96DE0 195 aaKnown RBP4.27□□□□□ -1.73
COMMD3-209ENST00000471350 GGNBP2Q9H3C7 697 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 ELP3Q9H9T3 547 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 DZANK1Q9NVP4 752 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 SOX13Q9UN79 622 aa4.27□□□□□ -1.73
COMMD3-209ENST00000471350 A6NHS1 94 aa4.26□□□□□ -1.73
COMMD3-209ENST00000471350 GSC2O15499 205 aa4.26□□□□□ -1.73
COMMD3-209ENST00000471350 COBLO75128 1261 aa4.26□□□□□ -1.73
COMMD3-209ENST00000471350 GP2P55259 537 aaKnown RBP4.26□□□□□ -1.73
COMMD3-209ENST00000471350 TTC39BQ5VTQ0 682 aaPredicted RBP4.26□□□□□ -1.73
COMMD3-209ENST00000471350 FAM83CQ9BQN1 747 aa4.26□□□□□ -1.73
COMMD3-209ENST00000471350 H3BRJ5 948 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 DLGAP3O95886 979 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 PTPRAP18433 802 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 HOXA10P31260 410 aaPredicted RBP4.25□□□□□ -1.73
COMMD3-209ENST00000471350 PIP4K2BP78356 416 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 DUOXA2Q1HG44 320 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 VN1R5Q7Z5H4 357 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 SHISA5Q8N114 240 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 ABTB2Q8N961 1025 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 WNT8BQ93098 351 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 UTP4Q969X6 686 aaKnown RBP4.25□□□□□ -1.73
COMMD3-209ENST00000471350 DBNDD2Q9BQY9 259 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 CEP41Q9BYV8 373 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 SEC31BQ9NQW1 1179 aa4.25□□□□□ -1.73
COMMD3-209ENST00000471350 FNDC3AQ9Y2H6 1198 aaKnown RBP4.25□□□□□ -1.73
COMMD3-209ENST00000471350 MEGF11A6BM72 1044 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 PDGFAP04085 211 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 TAL1P17542 331 aaPredicted RBP4.24□□□□□ -1.73
COMMD3-209ENST00000471350 ATP2B4P23634 1241 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 NCAPG2Q86XI2 1143 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 CLEC10AQ8IUN9 316 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 SHKBP1Q8TBC3 707 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 HELQQ8TDG4 1101 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 CCDC97Q96F63 343 aaPredicted RBP4.24□□□□□ -1.73
COMMD3-209ENST00000471350 SPACA7Q96KW9 195 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 NRSN2Q9GZP1 204 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 OSGEPQ9NPF4 335 aa4.24□□□□□ -1.73
COMMD3-209ENST00000471350 FAM177BA6PVY3 158 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 SOX1O00570 391 aaPredicted RBP4.23□□□□□ -1.73
COMMD3-209ENST00000471350 TIAF1O95411 115 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 BMP3P12645 472 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 NPR3P17342 541 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 NLRP12P59046 1061 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 COL19A1Q14993 1142 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 PEAR1Q5VY43 1037 aaPredicted RBP4.23□□□□□ -1.73
COMMD3-209ENST00000471350 ANKRD34AQ69YU3 496 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 ZNF438Q7Z4V0 828 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 TMEM102Q8N9M5 508 aaPredicted RBP4.23□□□□□ -1.73
COMMD3-209ENST00000471350 TTC16Q8NEE8 873 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 EDEM1Q92611 657 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 NXPE3Q969Y0 559 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 PBXIP1Q96AQ6 731 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 TMPRSS13Q9BYE2 586 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 ADGRE2Q9UHX3 823 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 SERPINA10Q9UK55 444 aa4.23□□□□□ -1.73
COMMD3-209ENST00000471350 TMEM88BA6NKF7 163 aa4.22□□□□□ -1.73
COMMD3-209ENST00000471350 PDE2AO00408 941 aaPredicted RBP4.22□□□□□ -1.73
COMMD3-209ENST00000471350 MSMPQ1L6U9 139 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms