RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 ABCC12Q96J65 1359 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 GMPSP49915 693 aaPredicted RBP11.63□□□□□ -0.55
XRN1-208ENST00000470537 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
XRN1-208ENST00000470537 KIAA2012Q0VF49 1180 aa11.63□□□□□ -0.55
XRN1-208ENST00000470537 TTLL7Q6ZT98 887 aa11.63□□□□□ -0.55
XRN1-208ENST00000470537 DDX46Q7L014 1031 aaKnown RBP11.63□□□□□ -0.55
XRN1-208ENST00000470537 THSD7BQ9C0I4 1608 aa11.63□□□□□ -0.55
XRN1-208ENST00000470537 NTSR2O95665 410 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 FMR1Q06787 632 aaKnown RBP eCLIP11.62□□□□□ -0.55
XRN1-208ENST00000470537 MFSD10Q14728 455 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 DPF2Q92785 391 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
XRN1-208ENST00000470537 SAGE1Q9NXZ1 904 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 CNOT7Q9UIV1 285 aaKnown RBP11.62□□□□□ -0.55
XRN1-208ENST00000470537 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 NUP98P52948 1817 aa11.62□□□□□ -0.55
XRN1-208ENST00000470537 UBN2Q6ZU65 1347 aa11.61□□□□□ -0.55
XRN1-208ENST00000470537 PPP2R1AP30153 589 aa11.61□□□□□ -0.55
XRN1-208ENST00000470537 HUNKP57058 714 aa11.61□□□□□ -0.55
XRN1-208ENST00000470537 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
XRN1-208ENST00000470537 RAD17O75943 681 aa11.6□□□□□ -0.55
XRN1-208ENST00000470537 RPS12P25398 132 aaKnown RBP11.6□□□□□ -0.55
XRN1-208ENST00000470537 RGMBQ6NW40 437 aa11.6□□□□□ -0.55
XRN1-208ENST00000470537 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
XRN1-208ENST00000470537 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
XRN1-208ENST00000470537 ABCC4O15439 1325 aa11.6□□□□□ -0.55
XRN1-208ENST00000470537 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
XRN1-208ENST00000470537 GRAPQ13588 217 aa11.59□□□□□ -0.55
XRN1-208ENST00000470537 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
XRN1-208ENST00000470537 USP48Q86UV5 1035 aa11.59□□□□□ -0.55
XRN1-208ENST00000470537 GRAPLQ8TC17 118 aaPredicted RBP11.59□□□□□ -0.55
XRN1-208ENST00000470537 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
XRN1-208ENST00000470537 LTBP1Q14766 1721 aa11.59□□□□□ -0.55
XRN1-208ENST00000470537 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
XRN1-208ENST00000470537 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
XRN1-208ENST00000470537 CASP8AP2Q9UKL3 1982 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 PPP1R3GB7ZBB8 358 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 NFE2L2Q16236 605 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 KRT26Q7Z3Y9 468 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 EYA3Q99504 573 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
XRN1-208ENST00000470537 TSPYL4Q9UJ04 414 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 COL4A5P29400 1685 aa11.58□□□□□ -0.56
XRN1-208ENST00000470537 HSP90B1P14625 803 aaKnown RBP11.57□□□□□ -0.56
XRN1-208ENST00000470537 EIF2S2P20042 333 aaKnown RBP11.57□□□□□ -0.56
XRN1-208ENST00000470537 ZNF157P51786 506 aaPredicted RBP11.57□□□□□ -0.56
XRN1-208ENST00000470537 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
XRN1-208ENST00000470537 SULF1Q8IWU6 871 aa11.57□□□□□ -0.56
XRN1-208ENST00000470537 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
XRN1-208ENST00000470537 LMOD3Q0VAK6 560 aa11.56□□□□□ -0.56
XRN1-208ENST00000470537 TCIRG1Q13488 830 aa11.56□□□□□ -0.56
XRN1-208ENST00000470537 PKN2Q16513 984 aaKnown RBP11.56□□□□□ -0.56
XRN1-208ENST00000470537 NSFL1CQ9UNZ2 370 aaKnown RBP11.56□□□□□ -0.56
XRN1-208ENST00000470537 C6orf229H3BNL8 230 aa11.55□□□□□ -0.56
XRN1-208ENST00000470537 TRPA1O75762 1119 aa11.55□□□□□ -0.56
XRN1-208ENST00000470537 HCLS1P14317 486 aaPredicted RBP11.55□□□□□ -0.56
XRN1-208ENST00000470537 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
XRN1-208ENST00000470537 COPS6Q7L5N1 327 aa11.55□□□□□ -0.56
XRN1-208ENST00000470537 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
XRN1-208ENST00000470537 TRPM4Q8TD43 1214 aa11.55□□□□□ -0.56
XRN1-208ENST00000470537 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
XRN1-208ENST00000470537 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
XRN1-208ENST00000470537 PDE4DIPQ5VU43 2346 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
XRN1-208ENST00000470537 FKBP1BP68106 108 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 PROX2Q3B8N5 592 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
XRN1-208ENST00000470537 PLEKHF1Q96S99 279 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 RNF186Q9NXI6 227 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 RABGEF1Q9UJ41 708 aa11.54□□□□□ -0.56
XRN1-208ENST00000470537 YDJCA8MPS7 323 aa11.53□□□□□ -0.56
XRN1-208ENST00000470537 FAM155AB1AL88 458 aaPredicted RBP11.53□□□□□ -0.56
XRN1-208ENST00000470537 PSMD14O00487 310 aa11.53□□□□□ -0.56
XRN1-208ENST00000470537 RGS20O76081 388 aa11.53□□□□□ -0.56
XRN1-208ENST00000470537 AIMP1Q12904 312 aaKnown RBP11.53□□□□□ -0.56
XRN1-208ENST00000470537 TBC1D10BQ4KMP7 808 aaPredicted RBP11.53□□□□□ -0.56
XRN1-208ENST00000470537 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
XRN1-208ENST00000470537 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
XRN1-208ENST00000470537 TYW1BQ6NUM6 668 aa11.53□□□□□ -0.56
XRN1-208ENST00000470537 ANKK1Q8NFD2 765 aa11.53□□□□□ -0.56
XRN1-208ENST00000470537 FBXW7Q969H0 707 aa11.53□□□□□ -0.56
XRN1-208ENST00000470537 THUMPD2Q9BTF0 503 aaKnown RBP11.53□□□□□ -0.56
XRN1-208ENST00000470537 ANKRD36CQ5JPF3 1778 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 KDM3BQ7LBC6 1761 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 COL9A1P20849 921 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 RIPK4P57078 832 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 PDIA6Q15084 440 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 SF3B3Q15393 1217 aaKnown RBP11.52□□□□□ -0.57
XRN1-208ENST00000470537 LRP10Q7Z4F1 713 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 XAGE3Q8WTP9 111 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 HDAC9Q9UKV0 1011 aa11.52□□□□□ -0.57
XRN1-208ENST00000470537 AKAP11Q9UKA4 1901 aa11.51□□□□□ -0.57
XRN1-208ENST00000470537 SLC10A3P09131 477 aa11.51□□□□□ -0.57
XRN1-208ENST00000470537 VIL1P09327 827 aaKnown RBP11.51□□□□□ -0.57
XRN1-208ENST00000470537 RPS8P62241 208 aaKnown RBP11.51□□□□□ -0.57
XRN1-208ENST00000470537 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
XRN1-208ENST00000470537 PLBD2Q8NHP8 589 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms