RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.61
SMC1A-205ENST00000469129 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
SMC1A-205ENST00000469129 COL4A1P02462 1669 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 RPAP1Q9BWH6 1393 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-205ENST00000469129 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
SMC1A-205ENST00000469129 PLSCR1O15162 318 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 NPHP1O15259 732 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 RNF113AO15541 343 aaKnown RBP11.2□□□□□ -0.62
SMC1A-205ENST00000469129 FGFR2P21802 821 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 ZMYM1Q5SVZ6 1142 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 EDC3Q96F86 508 aaKnown RBP11.2□□□□□ -0.62
SMC1A-205ENST00000469129 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 CWC22Q9HCG8 908 aaKnown RBP11.2□□□□□ -0.62
SMC1A-205ENST00000469129 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
SMC1A-205ENST00000469129 ANKRD31Q8N7Z5 1873 aa11.2□□□□□ -0.62
SMC1A-205ENST00000469129 PHF14O94880 888 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 DDIT3P35638 169 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMC1A-205ENST00000469129 PTH1RQ03431 593 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 NECTIN1Q15223 517 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
SMC1A-205ENST00000469129 DSCC1Q9BVC3 393 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
SMC1A-205ENST00000469129 LAMB1P07942 1786 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 TAF5LO75529 589 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
SMC1A-205ENST00000469129 PTMSP20962 102 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 R3HDM1Q15032 1099 aaKnown RBP11.18□□□□□ -0.62
SMC1A-205ENST00000469129 CCDC102BQ68D86 513 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 ZNF589Q86UQ0 364 aaPredicted RBP11.18□□□□□ -0.62
SMC1A-205ENST00000469129 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 APPBP2Q92624 585 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 BSDC1Q9NW68 430 aaPredicted RBP11.18□□□□□ -0.62
SMC1A-205ENST00000469129 CACNA1SQ13698 1873 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
SMC1A-205ENST00000469129 MAST3O60307 1309 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
SMC1A-205ENST00000469129 SLC27A2O14975 620 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 MCAMP43121 646 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 ZAP70P43403 619 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 ST5P78524 1137 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 NUCB2P80303 420 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 CHRNDQ07001 517 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 UBE4AQ14139 1066 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 ANKRD1Q15327 319 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 INTS4Q96HW7 963 aaKnown RBP11.17□□□□□ -0.62
SMC1A-205ENST00000469129 JAKMIP1Q96N16 626 aaKnown RBP11.17□□□□□ -0.62
SMC1A-205ENST00000469129 GBP4Q96PP9 640 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 UPF3BQ9BZI7 483 aaKnown RBP11.17□□□□□ -0.62
SMC1A-205ENST00000469129 ANKRD2Q9GZV1 360 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 GNL3LQ9NVN8 582 aaKnown RBP11.17□□□□□ -0.62
SMC1A-205ENST00000469129 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
SMC1A-205ENST00000469129 BLOC1S2Q6QNY1 142 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 RUFY3Q7L099 469 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 RASEFQ8IZ41 740 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 PROM2Q8N271 834 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 ZSCAN31Q96LW9 406 aaPredicted RBP11.16□□□□□ -0.62
SMC1A-205ENST00000469129 TTC14Q96N46 770 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
SMC1A-205ENST00000469129 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
SMC1A-205ENST00000469129 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.62
SMC1A-205ENST00000469129 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
SMC1A-205ENST00000469129 PHKA1P46020 1223 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 CUL4AQ13619 759 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 SCARF1Q14162 830 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 NFIXQ14938 502 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 RAB3GAP1Q15042 981 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 UBE3CQ15386 1083 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 SPATA5Q8NB90 893 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
SMC1A-205ENST00000469129 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
SMC1A-205ENST00000469129 PDRG1Q9NUG6 133 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 CTNNA3Q9UI47 895 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 MYH15Q9Y2K3 1946 aa11.15□□□□□ -0.62
SMC1A-205ENST00000469129 LTBP1Q14766 1721 aa11.15□□□□□ -0.63
SMC1A-205ENST00000469129 ZNF804BA4D1E1 1349 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 PDS5AQ29RF7 1337 aaKnown RBP11.14□□□□□ -0.63
SMC1A-205ENST00000469129 SRCAPQ6ZRS2 3230 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 SEMA3EO15041 775 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 GYS1P13807 737 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 ADD2P35612 726 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 RPS8P62241 208 aaKnown RBP11.14□□□□□ -0.63
SMC1A-205ENST00000469129 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 CAVIN4Q5BKX8 364 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 CCDC129Q6ZRS4 1044 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
SMC1A-205ENST00000469129 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms