RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 CCDC73Q6ZRK6 1079 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 FILIP1Q7Z7B0 1213 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 SCAND2PQ9GZW5 306 aaPredicted RBP20.47■□□□□ 0.87
TRIM46-207ENST00000468878 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
TRIM46-207ENST00000468878 MAST3O60307 1309 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 WDR17Q8IZU2 1322 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 COL15A1P39059 1388 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 H7C1W4 665 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
TRIM46-207ENST00000468878 CCDC191Q8NCU4 936 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 ZKSCAN3Q9BRR0 538 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 PUS7LQ9H0K6 701 aaKnown RBP20.47■□□□□ 0.87
TRIM46-207ENST00000468878 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
TRIM46-207ENST00000468878 PIBF1Q8WXW3 757 aa20.46■□□□□ 0.87
TRIM46-207ENST00000468878 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
TRIM46-207ENST00000468878 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
TRIM46-207ENST00000468878 IRS4O14654 1257 aaPredicted RBP20.46■□□□□ 0.87
TRIM46-207ENST00000468878 ZNF213O14771 459 aa20.46■□□□□ 0.87
TRIM46-207ENST00000468878 STK38Q15208 465 aa20.45■□□□□ 0.86
TRIM46-207ENST00000468878 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
TRIM46-207ENST00000468878 MPHOSPH8Q99549 860 aa20.45■□□□□ 0.86
TRIM46-207ENST00000468878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRIM46-207ENST00000468878 ZNF165P49910 485 aa20.45■□□□□ 0.86
TRIM46-207ENST00000468878 TCIRG1Q13488 830 aa20.45■□□□□ 0.86
TRIM46-207ENST00000468878 MARCKSP29966 332 aaPredicted RBP20.45■□□□□ 0.86
TRIM46-207ENST00000468878 PIP4K2BP78356 416 aa20.45■□□□□ 0.86
TRIM46-207ENST00000468878 A0A1B0GVL5 298 aa20.44■□□□□ 0.86
TRIM46-207ENST00000468878 PRC1O43663 620 aa20.44■□□□□ 0.86
TRIM46-207ENST00000468878 KINO60870 393 aaKnown RBP20.44■□□□□ 0.86
TRIM46-207ENST00000468878 JAG2Q9Y219 1238 aa20.44■□□□□ 0.86
TRIM46-207ENST00000468878 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
TRIM46-207ENST00000468878 LETM1O95202 739 aaPredicted RBP20.44■□□□□ 0.86
TRIM46-207ENST00000468878 FGAP02671 866 aa20.44■□□□□ 0.86
TRIM46-207ENST00000468878 PTGS1P23219 599 aa20.44■□□□□ 0.86
TRIM46-207ENST00000468878 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
TRIM46-207ENST00000468878 OFD1O75665 1012 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 HSP90AA4PQ58FG1 418 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 FSIP1Q8NA03 581 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 MIGA1Q8NAN2 632 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 UTYO14607 1347 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 AIFM3Q96NN9 605 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 USP28Q96RU2 1077 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.43■□□□□ 0.86
TRIM46-207ENST00000468878 ANKRD18BA2A2Z9 1011 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 EXOC5O00471 708 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 NRBP1Q9UHY1 535 aa20.43■□□□□ 0.86
TRIM46-207ENST00000468878 GPAA1O43292 621 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 SYNE3Q6ZMZ3 975 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 CCDC186Q7Z3E2 898 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 LRP10Q7Z4F1 713 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 CMTR1Q8N1G2 835 aaKnown RBP20.42■□□□□ 0.86
TRIM46-207ENST00000468878 C8orf76Q96K31 380 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 LRMPQ12912 555 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 RABL6Q3YEC7 729 aaPredicted RBP20.42■□□□□ 0.86
TRIM46-207ENST00000468878 DZIP3Q86Y13 1208 aaKnown RBP20.42■□□□□ 0.86
TRIM46-207ENST00000468878 PHKBQ93100 1093 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 AIDAQ96BJ3 306 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 NUP133Q8WUM0 1156 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 PGBD1Q96JS3 809 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 PDLIM2Q96JY6 352 aa20.42■□□□□ 0.86
TRIM46-207ENST00000468878 PRDM10Q9NQV6 1147 aa20.41■□□□□ 0.86
TRIM46-207ENST00000468878 CFAP45Q9UL16 551 aa20.41■□□□□ 0.86
TRIM46-207ENST00000468878 AKAP2Q9Y2D5 859 aa20.41■□□□□ 0.86
TRIM46-207ENST00000468878 B4E1Z4 1266 aa20.41■□□□□ 0.86
TRIM46-207ENST00000468878 AP5Z1O43299 807 aa20.41■□□□□ 0.86
TRIM46-207ENST00000468878 MINDY4BA8MYZ0 360 aa20.4■□□□□ 0.86
TRIM46-207ENST00000468878 PHKA1P46020 1223 aa20.4■□□□□ 0.86
TRIM46-207ENST00000468878 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
TRIM46-207ENST00000468878 ERVV-2B6SEH9 535 aa20.4■□□□□ 0.86
TRIM46-207ENST00000468878 EPB41L2O43491 1005 aaKnown RBP20.4■□□□□ 0.86
TRIM46-207ENST00000468878 ADD1P35611 737 aaKnown RBP20.4■□□□□ 0.86
TRIM46-207ENST00000468878 NOLC1Q14978 699 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRIM46-207ENST00000468878 CBX8Q9HC52 389 aa20.4■□□□□ 0.86
TRIM46-207ENST00000468878 SEC31BQ9NQW1 1179 aa20.4■□□□□ 0.86
TRIM46-207ENST00000468878 MED23Q9ULK4 1368 aa20.4■□□□□ 0.86
TRIM46-207ENST00000468878 C16orf45Q96MC5 204 aaPredicted RBP20.39■□□□□ 0.86
TRIM46-207ENST00000468878 CASP7P55210 303 aa20.39■□□□□ 0.85
TRIM46-207ENST00000468878 NSUN7Q8NE18 718 aaKnown RBP20.39■□□□□ 0.85
TRIM46-207ENST00000468878 ZMYM1Q5SVZ6 1142 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 RGPD5Q99666 1765 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 GOLGA6L6A8MZA4 724 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 PDIA3P30101 505 aaKnown RBP20.38■□□□□ 0.85
TRIM46-207ENST00000468878 MST1RQ04912 1400 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 CTDSPL2Q05D32 466 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 PTPN21Q16825 1174 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 FAM200AQ8TCP9 573 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 ATG3Q9NT62 314 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 LRP2BPQ9P2M1 347 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 TNS3Q68CZ2 1445 aa20.38■□□□□ 0.85
TRIM46-207ENST00000468878 SPECC1Q5M775 1068 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRIM46-207ENST00000468878 PYCARDQ9ULZ3 195 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 TDO2P48775 406 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 LRRFIP1Q32MZ4 808 aaKnown RBP20.37■□□□□ 0.85
TRIM46-207ENST00000468878 FAM182BQ5T319 152 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 VPS37DQ86XT2 251 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms