RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
SMC4-207ENST00000467263 ABI2Q9NYB9 513 aaPredicted RBP8.34□□□□□ -1.07
SMC4-207ENST00000467263 FSCN2O14926 492 aa8.33□□□□□ -1.08
SMC4-207ENST00000467263 TRPA1O75762 1119 aa8.33□□□□□ -1.08
SMC4-207ENST00000467263 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
SMC4-207ENST00000467263 KLHDC7BQ96G42 594 aa8.33□□□□□ -1.08
SMC4-207ENST00000467263 SPACA7Q96KW9 195 aa8.33□□□□□ -1.08
SMC4-207ENST00000467263 PBX4Q9BYU1 374 aa8.33□□□□□ -1.08
SMC4-207ENST00000467263 MUC3BQ9H195 1237 aa8.33□□□□□ -1.08
SMC4-207ENST00000467263 PTCD1O75127 700 aaKnown RBP8.32□□□□□ -1.08
SMC4-207ENST00000467263 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
SMC4-207ENST00000467263 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
SMC4-207ENST00000467263 IGLV1-40P01703 118 aa8.32□□□□□ -1.08
SMC4-207ENST00000467263 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
SMC4-207ENST00000467263 HHIPQ96QV1 700 aa8.32□□□□□ -1.08
SMC4-207ENST00000467263 ELP3Q9H9T3 547 aa8.32□□□□□ -1.08
SMC4-207ENST00000467263 A6NHS1 94 aa8.31□□□□□ -1.08
SMC4-207ENST00000467263 HGSNATQ68CP4 663 aa8.31□□□□□ -1.08
SMC4-207ENST00000467263 TRIM42Q8IWZ5 723 aa8.31□□□□□ -1.08
SMC4-207ENST00000467263 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
SMC4-207ENST00000467263 FAM13BQ9NYF5 915 aa8.31□□□□□ -1.08
SMC4-207ENST00000467263 STOML1Q9UBI4 398 aa8.31□□□□□ -1.08
SMC4-207ENST00000467263 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
SMC4-207ENST00000467263 HMX2A2RU54 273 aa8.3□□□□□ -1.08
SMC4-207ENST00000467263 NFKBIEO00221 500 aa8.3□□□□□ -1.08
SMC4-207ENST00000467263 MCTP1Q6DN14 999 aa8.3□□□□□ -1.08
SMC4-207ENST00000467263 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
SMC4-207ENST00000467263 ZDHHC13Q8IUH4 622 aa8.3□□□□□ -1.08
SMC4-207ENST00000467263 FAM46AQ96IP4 442 aaKnown RBP8.3□□□□□ -1.08
SMC4-207ENST00000467263 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
SMC4-207ENST00000467263 DHX15O43143 795 aaKnown RBP8.29□□□□□ -1.08
SMC4-207ENST00000467263 DUOXA2Q1HG44 320 aa8.29□□□□□ -1.08
SMC4-207ENST00000467263 SLC51AQ86UW1 340 aa8.29□□□□□ -1.08
SMC4-207ENST00000467263 C1orf127Q8N9H9 656 aa8.29□□□□□ -1.08
SMC4-207ENST00000467263 ADAM19Q9H013 955 aa8.29□□□□□ -1.08
SMC4-207ENST00000467263 GGNBP2Q9H3C7 697 aa8.29□□□□□ -1.08
SMC4-207ENST00000467263 ATP2B4P23634 1241 aa8.28□□□□□ -1.08
SMC4-207ENST00000467263 UTP4Q969X6 686 aaKnown RBP8.28□□□□□ -1.08
SMC4-207ENST00000467263 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
SMC4-207ENST00000467263 PTPRAP18433 802 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 NFIAQ12857 509 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 ABTB2Q8N961 1025 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 DCAF11Q8TEB1 546 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 EDEM1Q92611 657 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
SMC4-207ENST00000467263 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
SMC4-207ENST00000467263 PRR19A6NJB7 356 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 KIAA1324LA8MWY0 1029 aaPredicted RBP8.26□□□□□ -1.09
SMC4-207ENST00000467263 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
SMC4-207ENST00000467263 PREPP48147 710 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 PDE12Q6L8Q7 609 aaKnown RBP8.26□□□□□ -1.09
SMC4-207ENST00000467263 KLHL23Q8NBE8 558 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 MYRFLQ96LU7 910 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 KRTAP9-9Q9BYP9 154 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 KRTAP9-4Q9BYQ2 154 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 CEP41Q9BYV8 373 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 CHRDQ9H2X0 955 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 DZANK1Q9NVP4 752 aa8.26□□□□□ -1.09
SMC4-207ENST00000467263 NLRP12P59046 1061 aa8.25□□□□□ -1.09
SMC4-207ENST00000467263 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
SMC4-207ENST00000467263 COL17A1Q9UMD9 1497 aaPredicted RBP8.25□□□□□ -1.09
SMC4-207ENST00000467263 H3BRJ5 948 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 COBLO75128 1261 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 MTMR3Q13615 1198 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 RNF43Q68DV7 783 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 FAM117BQ6P1L5 589 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 FAM20CQ8IXL6 584 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 SLC7A3Q8WY07 619 aa8.24□□□□□ -1.09
SMC4-207ENST00000467263 GSC2O15499 205 aa8.23□□□□□ -1.09
SMC4-207ENST00000467263 PDGFAP04085 211 aa8.23□□□□□ -1.09
SMC4-207ENST00000467263 PDE2AO00408 941 aaPredicted RBP8.22□□□□□ -1.09
SMC4-207ENST00000467263 BMP3P12645 472 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 SPINK2P20155 84 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 CES1P23141 567 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 MPSTP25325 297 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 UVSSAQ2YD98 709 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 HELQQ8TDG4 1101 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 SOX13Q9UN79 622 aa8.22□□□□□ -1.09
SMC4-207ENST00000467263 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
SMC4-207ENST00000467263 GP2P55259 537 aaKnown RBP8.21□□□□□ -1.1
SMC4-207ENST00000467263 PIP4K2BP78356 416 aa8.21□□□□□ -1.1
SMC4-207ENST00000467263 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.21□□□□□ -1.1
SMC4-207ENST00000467263 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
SMC4-207ENST00000467263 SHKBP1Q8TBC3 707 aa8.21□□□□□ -1.1
SMC4-207ENST00000467263 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.1
SMC4-207ENST00000467263 DLGAP3O95886 979 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 EIF1AXP47813 144 aaKnown RBP8.2□□□□□ -1.1
SMC4-207ENST00000467263 CLEC10AQ8IUN9 316 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 SHISA5Q8N114 240 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 FAM83CQ9BQN1 747 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 KCNF1Q9H3M0 494 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 GOLGA2P5Q9HBQ8 144 aa8.2□□□□□ -1.1
SMC4-207ENST00000467263 SOX1O00570 391 aaPredicted RBP8.19□□□□□ -1.1
SMC4-207ENST00000467263 EREGO14944 169 aa8.19□□□□□ -1.1
SMC4-207ENST00000467263 HOXA10P31260 410 aaPredicted RBP8.19□□□□□ -1.1
SMC4-207ENST00000467263 NOM1Q5C9Z4 860 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 257.6 ms