RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 WNK4Q96J92 1243 aa19.88■□□□□ 0.77
NCSTN-210ENST00000465223 CLMNQ96JQ2 1002 aa19.88■□□□□ 0.77
NCSTN-210ENST00000465223 SEC31BQ9NQW1 1179 aa19.88■□□□□ 0.77
NCSTN-210ENST00000465223 PTCH2Q9Y6C5 1203 aa19.88■□□□□ 0.77
NCSTN-210ENST00000465223 SLC9C1Q4G0N8 1177 aa19.87■□□□□ 0.77
NCSTN-210ENST00000465223 WTIPA6NIX2 430 aaPredicted RBP19.86■□□□□ 0.77
NCSTN-210ENST00000465223 ATP5J2-PTCD1G3V325 749 aa19.85■□□□□ 0.77
NCSTN-210ENST00000465223 ZBTB48P10074 688 aaPredicted RBP19.85■□□□□ 0.77
NCSTN-210ENST00000465223 DPF3Q92784 378 aa19.85■□□□□ 0.77
NCSTN-210ENST00000465223 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
NCSTN-210ENST00000465223 PODNQ7Z5L7 613 aa19.84■□□□□ 0.77
NCSTN-210ENST00000465223 NBPF11Q86T75 865 aa19.84■□□□□ 0.77
NCSTN-210ENST00000465223 ISCA1Q9BUE6 129 aa19.84■□□□□ 0.77
NCSTN-210ENST00000465223 IRS4O14654 1257 aaPredicted RBP19.83■□□□□ 0.77
NCSTN-210ENST00000465223 GJA5P36382 358 aa19.83■□□□□ 0.77
NCSTN-210ENST00000465223 DACT2Q5SW24 774 aa19.83■□□□□ 0.77
NCSTN-210ENST00000465223 OGFOD1Q8N543 542 aa19.83■□□□□ 0.77
NCSTN-210ENST00000465223 FBXW7Q969H0 707 aa19.83■□□□□ 0.77
NCSTN-210ENST00000465223 PTPN18Q99952 460 aa19.83■□□□□ 0.77
NCSTN-210ENST00000465223 ZSWIM8A7E2V4 1837 aa19.82■□□□□ 0.76
NCSTN-210ENST00000465223 MNX1P50219 401 aaPredicted RBP19.82■□□□□ 0.76
NCSTN-210ENST00000465223 APOBEC3FQ8IUX4 373 aaKnown RBP19.82■□□□□ 0.76
NCSTN-210ENST00000465223 SH3TC2Q8TF17 1288 aa19.82■□□□□ 0.76
NCSTN-210ENST00000465223 PRO3102Q9H379 93 aa19.82■□□□□ 0.76
NCSTN-210ENST00000465223 SSC5DA1L4H1 1573 aa19.82■□□□□ 0.76
NCSTN-210ENST00000465223 SOX1O00570 391 aaPredicted RBP19.81■□□□□ 0.76
NCSTN-210ENST00000465223 MAP3K11Q16584 847 aa19.81■□□□□ 0.76
NCSTN-210ENST00000465223 OTUD7BQ6GQQ9 843 aa19.81■□□□□ 0.76
NCSTN-210ENST00000465223 COL6A3P12111 3177 aa19.81■□□□□ 0.76
NCSTN-210ENST00000465223 PPP2R1AP30153 589 aa19.8■□□□□ 0.76
NCSTN-210ENST00000465223 NFE2L2Q16236 605 aa19.8■□□□□ 0.76
NCSTN-210ENST00000465223 NEFMP07197 916 aa19.79■□□□□ 0.76
NCSTN-210ENST00000465223 KCNA4P22459 653 aa19.79■□□□□ 0.76
NCSTN-210ENST00000465223 SHISA4Q96DD7 197 aa19.79■□□□□ 0.76
NCSTN-210ENST00000465223 LRCH3Q96II8 777 aa19.79■□□□□ 0.76
NCSTN-210ENST00000465223 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
NCSTN-210ENST00000465223 XDHP47989 1333 aa19.78■□□□□ 0.76
NCSTN-210ENST00000465223 ATP2B4P23634 1241 aa19.78■□□□□ 0.76
NCSTN-210ENST00000465223 PLBD2Q8NHP8 589 aa19.78■□□□□ 0.76
NCSTN-210ENST00000465223 PLEKHF1Q96S99 279 aa19.78■□□□□ 0.76
NCSTN-210ENST00000465223 DEFB129Q9H1M3 183 aa19.78■□□□□ 0.76
NCSTN-210ENST00000465223 TESPA1A2RU30 521 aaPredicted RBP19.77■□□□□ 0.76
NCSTN-210ENST00000465223 ANKRD13DQ6ZTN6 518 aa19.77■□□□□ 0.76
NCSTN-210ENST00000465223 ZBED3Q96IU2 234 aaPredicted RBP19.77■□□□□ 0.76
NCSTN-210ENST00000465223 CHPF2Q9P2E5 772 aa19.77■□□□□ 0.76
NCSTN-210ENST00000465223 CUL9Q8IWT3 2517 aa19.76■□□□□ 0.75
NCSTN-210ENST00000465223 PPP1R12BO60237 982 aaPredicted RBP19.76■□□□□ 0.75
NCSTN-210ENST00000465223 KRT24Q2M2I5 525 aa19.76■□□□□ 0.75
NCSTN-210ENST00000465223 KIAA0825Q8IV33 1275 aa19.76■□□□□ 0.75
NCSTN-210ENST00000465223 MYO3BQ8WXR4 1341 aa19.76■□□□□ 0.75
NCSTN-210ENST00000465223 COL1A1P02452 1464 aaPredicted RBP19.75■□□□□ 0.75
NCSTN-210ENST00000465223 STRIP1Q5VSL9 837 aa19.75■□□□□ 0.75
NCSTN-210ENST00000465223 ARHGAP39Q9C0H5 1083 aa19.75■□□□□ 0.75
NCSTN-210ENST00000465223 RANBP2P49792 3224 aaKnown RBP19.74■□□□□ 0.75
NCSTN-210ENST00000465223 SPEF2Q9C093 1822 aa19.74■□□□□ 0.75
NCSTN-210ENST00000465223 OTOFQ9HC10 1997 aa19.74■□□□□ 0.75
NCSTN-210ENST00000465223 A0A0C4DFX4 3053 aa19.74■□□□□ 0.75
NCSTN-210ENST00000465223 ARHGEF6Q15052 776 aa19.74■□□□□ 0.75
NCSTN-210ENST00000465223 MTFR1Q15390 333 aa19.74■□□□□ 0.75
NCSTN-210ENST00000465223 MED23Q9ULK4 1368 aa19.73■□□□□ 0.75
NCSTN-210ENST00000465223 USP2O75604 605 aaPredicted RBP19.73■□□□□ 0.75
NCSTN-210ENST00000465223 TAF1CQ15572 869 aaPredicted RBP19.73■□□□□ 0.75
NCSTN-210ENST00000465223 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
NCSTN-210ENST00000465223 PCDHAC2Q9Y5I4 1007 aa19.73■□□□□ 0.75
NCSTN-210ENST00000465223 ECM29Q5VYK3 1845 aa19.73■□□□□ 0.75
NCSTN-210ENST00000465223 CCDC152Q4G0S7 254 aa19.72■□□□□ 0.75
NCSTN-210ENST00000465223 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
NCSTN-210ENST00000465223 NBPF12Q5TAG4 269 aaPredicted RBP19.72■□□□□ 0.75
NCSTN-210ENST00000465223 ANKRD18AQ8IVF6 992 aa19.72■□□□□ 0.75
NCSTN-210ENST00000465223 MS4A4AQ96JQ5 239 aa19.72■□□□□ 0.75
NCSTN-210ENST00000465223 ELP3Q9H9T3 547 aa19.72■□□□□ 0.75
NCSTN-210ENST00000465223 ZBTB7BO15156 539 aaPredicted RBP19.71■□□□□ 0.75
NCSTN-210ENST00000465223 ECM2O94769 699 aaPredicted RBP19.71■□□□□ 0.75
NCSTN-210ENST00000465223 TXNRD3Q86VQ6 643 aa19.71■□□□□ 0.75
NCSTN-210ENST00000465223 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
NCSTN-210ENST00000465223 BRI3BPQ8WY22 251 aa19.71■□□□□ 0.75
NCSTN-210ENST00000465223 OPTNQ96CV9 577 aa19.71■□□□□ 0.75
NCSTN-210ENST00000465223 ZFYVE28Q9HCC9 887 aa19.71■□□□□ 0.75
NCSTN-210ENST00000465223 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
NCSTN-210ENST00000465223 UNCXA6NJT0 531 aa19.7■□□□□ 0.74
NCSTN-210ENST00000465223 IREB2P48200 963 aaKnown RBP19.7■□□□□ 0.74
NCSTN-210ENST00000465223 TRIM28Q13263 835 aaKnown RBP19.7■□□□□ 0.74
NCSTN-210ENST00000465223 TTLL5Q6EMB2 1281 aa19.7■□□□□ 0.74
NCSTN-210ENST00000465223 UBE2Q1Q7Z7E8 422 aa19.7■□□□□ 0.74
NCSTN-210ENST00000465223 ANKRD13AQ8IZ07 590 aa19.7■□□□□ 0.74
NCSTN-210ENST00000465223 HTATIP2Q9BUP3 242 aa19.7■□□□□ 0.74
NCSTN-210ENST00000465223 COL25A1Q9BXS0 654 aaPredicted RBP19.7■□□□□ 0.74
NCSTN-210ENST00000465223 CLRN2A0PK11 232 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 DLGAP5Q15398 846 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 FAM43AQ8N2R8 423 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 COA1Q9GZY4 146 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 PPP2R3BQ9Y5P8 575 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 NR2E3Q9Y5X4 410 aa19.69■□□□□ 0.74
NCSTN-210ENST00000465223 A0A1W2PPC1 479 aa19.68■□□□□ 0.74
NCSTN-210ENST00000465223 PDE8AO60658 829 aa19.68■□□□□ 0.74
NCSTN-210ENST00000465223 MMP14P50281 582 aa19.68■□□□□ 0.74
NCSTN-210ENST00000465223 GTF2IP78347 998 aa19.68■□□□□ 0.74
NCSTN-210ENST00000465223 SUPT20HL1Q3ZLR7 823 aa19.68■□□□□ 0.74
NCSTN-210ENST00000465223 PCGF6Q9BYE7 350 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms