RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 EPHA1P21709 976 aa9.17□□□□□ -0.94
UBR4-209ENST00000465036 KRTAP4-12Q9BQ66 201 aa9.17□□□□□ -0.94
UBR4-209ENST00000465036 OSGEPQ9NPF4 335 aa9.17□□□□□ -0.94
UBR4-209ENST00000465036 SEC31BQ9NQW1 1179 aa9.17□□□□□ -0.94
UBR4-209ENST00000465036 TMEM63CQ9P1W3 806 aa9.17□□□□□ -0.94
UBR4-209ENST00000465036 SERPINA10Q9UK55 444 aa9.17□□□□□ -0.94
UBR4-209ENST00000465036 FAM177BA6PVY3 158 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 KIAA1324LA8MWY0 1029 aaPredicted RBP9.16□□□□□ -0.94
UBR4-209ENST00000465036 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 DUOXA2Q1HG44 320 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 TXNDC11Q6PKC3 985 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 ZNF438Q7Z4V0 828 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
UBR4-209ENST00000465036 H3BRJ5 948 aa9.15□□□□□ -0.94
UBR4-209ENST00000465036 PMEPA1Q969W9 287 aa9.15□□□□□ -0.94
UBR4-209ENST00000465036 SH2B1Q9NRF2 756 aaPredicted RBP9.15□□□□□ -0.94
UBR4-209ENST00000465036 CNTN3Q9P232 1028 aa9.15□□□□□ -0.94
UBR4-209ENST00000465036 NFKBIEO00221 500 aa9.14□□□□□ -0.95
UBR4-209ENST00000465036 COBLO75128 1261 aa9.14□□□□□ -0.95
UBR4-209ENST00000465036 PCSK2P16519 638 aa9.14□□□□□ -0.95
UBR4-209ENST00000465036 CABP4P57796 275 aa9.14□□□□□ -0.95
UBR4-209ENST00000465036 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
UBR4-209ENST00000465036 UTP4Q969X6 686 aaKnown RBP9.14□□□□□ -0.95
UBR4-209ENST00000465036 CCDC97Q96F63 343 aaPredicted RBP9.14□□□□□ -0.95
UBR4-209ENST00000465036 MYRFLQ96LU7 910 aa9.14□□□□□ -0.95
UBR4-209ENST00000465036 CARD10Q9BWT7 1032 aa9.14□□□□□ -0.95
UBR4-209ENST00000465036 ADAM11O75078 769 aa9.13□□□□□ -0.95
UBR4-209ENST00000465036 SSTR4P31391 388 aa9.13□□□□□ -0.95
UBR4-209ENST00000465036 NFIAQ12857 509 aa9.13□□□□□ -0.95
UBR4-209ENST00000465036 KLHDC7BQ96G42 594 aa9.13□□□□□ -0.95
UBR4-209ENST00000465036 DZANK1Q9NVP4 752 aa9.13□□□□□ -0.95
UBR4-209ENST00000465036 COL17A1Q9UMD9 1497 aaPredicted RBP9.13□□□□□ -0.95
UBR4-209ENST00000465036 MZF1P28698 734 aaPredicted RBP9.12□□□□□ -0.95
UBR4-209ENST00000465036 NOM1Q5C9Z4 860 aaKnown RBP9.12□□□□□ -0.95
UBR4-209ENST00000465036 RNF43Q68DV7 783 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 ANKRD34AQ69YU3 496 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 MCTP1Q6DN14 999 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
UBR4-209ENST00000465036 ATCAYQ86WG3 371 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 CLEC10AQ8IUN9 316 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 EDEM1Q92611 657 aa9.12□□□□□ -0.95
UBR4-209ENST00000465036 CES1P23141 567 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.11□□□□□ -0.95
UBR4-209ENST00000465036 C1orf127Q8N9H9 656 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 FAM83CQ9BQN1 747 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 DBNDD2Q9BQY9 259 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 RNF208Q9H0X6 261 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 KANSL3Q9P2N6 904 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 HIF3AQ9Y2N7 669 aa9.11□□□□□ -0.95
UBR4-209ENST00000465036 PDE2AO00408 941 aaPredicted RBP9.1□□□□□ -0.95
UBR4-209ENST00000465036 MED26O95402 600 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 PDGFAP04085 211 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 CDC25BP30305 580 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 FAM20CQ8IXL6 584 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 TMEM102Q8N9M5 508 aaPredicted RBP9.1□□□□□ -0.95
UBR4-209ENST00000465036 GGNBP2Q9H3C7 697 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 SOX13Q9UN79 622 aa9.1□□□□□ -0.95
UBR4-209ENST00000465036 MEGF11A6BM72 1044 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 DDX3YO15523 660 aaKnown RBP9.09□□□□□ -0.95
UBR4-209ENST00000465036 TGFB1P01137 390 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 NPR3P17342 541 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 TRIM42Q8IWZ5 723 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 UBASH3BQ8TF42 649 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 CHRDQ9H2X0 955 aa9.09□□□□□ -0.95
UBR4-209ENST00000465036 GRIK1P39086 918 aa9.08□□□□□ -0.96
UBR4-209ENST00000465036 DNM1Q05193 864 aaKnown RBP9.08□□□□□ -0.96
UBR4-209ENST00000465036 TTC16Q8NEE8 873 aa9.08□□□□□ -0.96
UBR4-209ENST00000465036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.08□□□□□ -0.96
UBR4-209ENST00000465036 NISCHQ9Y2I1 1504 aa9.07□□□□□ -0.96
UBR4-209ENST00000465036 HMX2A2RU54 273 aa9.07□□□□□ -0.96
UBR4-209ENST00000465036 PRR19A6NJB7 356 aa9.07□□□□□ -0.96
UBR4-209ENST00000465036 EIF1AXP47813 144 aaKnown RBP9.07□□□□□ -0.96
UBR4-209ENST00000465036 ARL4DP49703 201 aa9.07□□□□□ -0.96
UBR4-209ENST00000465036 SART1O43290 800 aaKnown RBP9.06□□□□□ -0.96
UBR4-209ENST00000465036 SPINK2P20155 84 aa9.06□□□□□ -0.96
UBR4-209ENST00000465036 NXPE3Q969Y0 559 aa9.06□□□□□ -0.96
UBR4-209ENST00000465036 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
UBR4-209ENST00000465036 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
UBR4-209ENST00000465036 BMP3P12645 472 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 ACPPP15309 386 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 MPSTP25325 297 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 SSFA2P28290 1259 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 USP5P45974 858 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 PREPP48147 710 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 EHHADHQ08426 723 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 C19orf57Q0VDD7 668 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 LCE3BQ5TA77 95 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 DTX1Q86Y01 620 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 GTF3C2Q8WUA4 911 aaPredicted RBP9.05□□□□□ -0.96
UBR4-209ENST00000465036 BSNDQ8WZ55 320 aa9.05□□□□□ -0.96
UBR4-209ENST00000465036 SOX17Q9H6I2 414 aaPredicted RBP9.05□□□□□ -0.96
UBR4-209ENST00000465036 EDN3P14138 238 aa9.04□□□□□ -0.96
UBR4-209ENST00000465036 C8orf34Q49A92 452 aa9.04□□□□□ -0.96
UBR4-209ENST00000465036 BEND4Q6ZU67 534 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms