RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TCIRG1Q13488 830 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
RTN4-212ENST00000461004 YTHDC1Q96MU7 727 aaKnown RBP9.35□□□□□ -0.91
RTN4-212ENST00000461004 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 ZNF652Q9Y2D9 606 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 ADCY9O60503 1353 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 C10orf71Q711Q0 1435 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 NUP98P52948 1817 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
RTN4-212ENST00000461004 F6X3S4 739 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 SPTLC1O15269 473 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 DPEP1P16444 411 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 KCNA3P22001 575 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 FLIIQ13045 1269 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
RTN4-212ENST00000461004 RIC3Q7Z5B4 369 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 NBPF5PQ86XG9 351 aaPredicted RBP9.34□□□□□ -0.91
RTN4-212ENST00000461004 MYD88Q99836 296 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 PCDHGC3Q9UN70 934 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 MAP3K2Q9Y2U5 619 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 PCDHB15Q9Y5E8 787 aa9.34□□□□□ -0.91
RTN4-212ENST00000461004 ATP10DQ9P241 1426 aa9.33□□□□□ -0.92
RTN4-212ENST00000461004 ACTN4O43707 911 aaKnown RBP9.33□□□□□ -0.92
RTN4-212ENST00000461004 NTSR2O95665 410 aa9.33□□□□□ -0.92
RTN4-212ENST00000461004 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
RTN4-212ENST00000461004 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
RTN4-212ENST00000461004 KSR2Q6VAB6 950 aa9.33□□□□□ -0.92
RTN4-212ENST00000461004 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
RTN4-212ENST00000461004 METTL22Q9BUU2 404 aaPredicted RBP9.33□□□□□ -0.92
RTN4-212ENST00000461004 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
RTN4-212ENST00000461004 ABCC12Q96J65 1359 aa9.33□□□□□ -0.92
RTN4-212ENST00000461004 PXDNLA1KZ92 1463 aa9.33□□□□□ -0.92
RTN4-212ENST00000461004 NRXN2Q9P2S2 1712 aa9.32□□□□□ -0.92
RTN4-212ENST00000461004 IGKV5-2P06315 115 aa9.32□□□□□ -0.92
RTN4-212ENST00000461004 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
RTN4-212ENST00000461004 RARSP54136 660 aaKnown RBP9.32□□□□□ -0.92
RTN4-212ENST00000461004 USP46P62068 366 aa9.32□□□□□ -0.92
RTN4-212ENST00000461004 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
RTN4-212ENST00000461004 CWF19L2Q2TBE0 894 aaKnown RBP9.32□□□□□ -0.92
RTN4-212ENST00000461004 PUS10Q3MIT2 529 aaKnown RBP9.32□□□□□ -0.92
RTN4-212ENST00000461004 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
RTN4-212ENST00000461004 NPHP1O15259 732 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 BCAR3O75815 825 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
RTN4-212ENST00000461004 PTPN5P54829 565 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 TGFB2P61812 414 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 DIXDC1Q155Q3 683 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 HSP90AB3PQ58FF7 597 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 C2CD5Q86YS7 1000 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 FAM89AQ96GI7 184 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
RTN4-212ENST00000461004 UTP14AQ9BVJ6 771 aaKnown RBP9.31□□□□□ -0.92
RTN4-212ENST00000461004 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 CHMP4AQ9BY43 222 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 SMC4Q9NTJ3 1288 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 TNNQ9UQP3 1299 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 N4BP2Q86UW6 1770 aaPredicted RBP9.31□□□□□ -0.92
RTN4-212ENST00000461004 KIAA1551Q9HCM1 1747 aa9.31□□□□□ -0.92
RTN4-212ENST00000461004 ANKRD31Q8N7Z5 1873 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 DDX58O95786 925 aaKnown RBP9.3□□□□□ -0.92
RTN4-212ENST00000461004 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
RTN4-212ENST00000461004 ST5P78524 1137 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 QPCTQ16769 361 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 PARP10Q53GL7 1025 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 MORN1Q5T089 497 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
RTN4-212ENST00000461004 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
RTN4-212ENST00000461004 KIF13BQ9NQT8 1826 aa9.3□□□□□ -0.92
RTN4-212ENST00000461004 ARFGEF2Q9Y6D5 1785 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
RTN4-212ENST00000461004 GPR162Q16538 588 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 BEND3Q5T5X7 828 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 ZNF622Q969S3 477 aaKnown RBP eCLIP9.29□□□□□ -0.92
RTN4-212ENST00000461004 NYXQ9GZU5 481 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
RTN4-212ENST00000461004 KLRG2A4D1S0 409 aaPredicted RBP9.28□□□□□ -0.92
RTN4-212ENST00000461004 H0YIN7 160 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 FDX1P10109 184 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 SRGNP10124 158 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 PDE6BP35913 854 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 GJA5P36382 358 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 SLC10A5Q5PT55 438 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 SLC4A10Q6U841 1118 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 CCDC191Q8NCU4 936 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 CWC25Q9NXE8 425 aaPredicted RBP9.28□□□□□ -0.92
RTN4-212ENST00000461004 PIM2Q9P1W9 311 aa9.28□□□□□ -0.92
RTN4-212ENST00000461004 SLC27A5Q9Y2P5 690 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms