RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 TMX3Q96JJ7 454 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 RGPD3A6NKT7 1758 aaPredicted RBP9.67□□□□□ -0.86
SFPQ-202ENST00000460428 RGPD4Q7Z3J3 1758 aa9.67□□□□□ -0.86
SFPQ-202ENST00000460428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
SFPQ-202ENST00000460428 KLRG2A4D1S0 409 aaPredicted RBP9.66□□□□□ -0.86
SFPQ-202ENST00000460428 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 TRIM37O94972 964 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 GYS1P13807 737 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 ZAP70P43403 619 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 CHRNDQ07001 517 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 KRT32Q14532 448 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 NFIXQ14938 502 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 UBE3CQ15386 1083 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
SFPQ-202ENST00000460428 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 NBPF5PQ86XG9 351 aaPredicted RBP9.66□□□□□ -0.86
SFPQ-202ENST00000460428 APPBP2Q92624 585 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 COL4A1P02462 1669 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 DOCK2Q92608 1830 aa9.66□□□□□ -0.86
SFPQ-202ENST00000460428 PDS5AQ29RF7 1337 aaKnown RBP9.65□□□□□ -0.86
SFPQ-202ENST00000460428 CYP2E1P05181 493 aaPredicted RBP9.65□□□□□ -0.86
SFPQ-202ENST00000460428 RXRBP28702 533 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.86
SFPQ-202ENST00000460428 ADD2P35612 726 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 PHKA1P46020 1223 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 RPS8P62241 208 aaKnown RBP9.65□□□□□ -0.86
SFPQ-202ENST00000460428 NUCB2P80303 420 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 CRY2Q49AN0 593 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 SMIM5Q71RC9 77 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 FBXL16Q8N461 479 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 AKT1S1Q96B36 256 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 SEC62Q99442 399 aaKnown RBP9.65□□□□□ -0.86
SFPQ-202ENST00000460428 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.65□□□□□ -0.862e-22■■□□□ 11.8
SFPQ-202ENST00000460428 ANKRD2Q9GZV1 360 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 MINPP1Q9UNW1 487 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 CYP46A1Q9Y6A2 500 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
SFPQ-202ENST00000460428 MYH7P12883 1935 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 MAST3O60307 1309 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 SEMA3EO15041 775 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 HSPD1P10809 573 aaKnown RBP9.64□□□□□ -0.87
SFPQ-202ENST00000460428 FKBP4Q02790 459 aaKnown RBP eCLIP9.64□□□□□ -0.87
SFPQ-202ENST00000460428 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 TMED8Q6PL24 325 aaPredicted RBP9.64□□□□□ -0.87
SFPQ-202ENST00000460428 BICDL1Q6ZP65 573 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 SPATA5Q8NB90 893 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 CELF1Q92879 486 aaKnown RBP9.64□□□□□ -0.87
SFPQ-202ENST00000460428 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
SFPQ-202ENST00000460428 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
SFPQ-202ENST00000460428 ZMYM6O95789 1325 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 IRS2Q9Y4H2 1338 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 NRXN2Q9P2S2 1712 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 TCRBV5S4A2TA0A5A2 114 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 CHGBP05060 677 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 CYP21A2P08686 494 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 HOXA10P31260 410 aaPredicted RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 PRR5LQ6MZQ0 368 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 C15orf52Q6ZUT6 534 aaKnown RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 AGXT2Q9BYV1 514 aa9.63□□□□□ -0.87
SFPQ-202ENST00000460428 UPF3BQ9BZI7 483 aaKnown RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 SH2B1Q9NRF2 756 aaPredicted RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 RGS17Q9UGC6 210 aaPredicted RBP9.63□□□□□ -0.87
SFPQ-202ENST00000460428 TNRC6CQ9HCJ0 1690 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 M0R2C6 588 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 FOXP2O15409 715 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 FRAT2O75474 233 aaPredicted RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 SERPINB2P05120 415 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 HSP90AA1P07900 732 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 HMGB1P09429 215 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 PDIA4P13667 645 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 KCNJ4P48050 445 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 AK2P54819 239 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 GRAPQ13588 217 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 RASGRF1Q13972 1273 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 ANKRD1Q15327 319 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 ALX1Q15699 326 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 CCDC129Q6ZRS4 1044 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 CNBD1Q8NA66 436 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 GRAPLQ8TC17 118 aaPredicted RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 FAM84BQ96KN1 310 aaPredicted RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 NEK1Q96PY6 1258 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 PIH1D3Q9NQM4 214 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 PDRG1Q9NUG6 133 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 GNL3LQ9NVN8 582 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 CTNNA3Q9UI47 895 aa9.62□□□□□ -0.87
SFPQ-202ENST00000460428 TNS1Q9HBL0 1735 aaKnown RBP9.62□□□□□ -0.87
SFPQ-202ENST00000460428 PDE6AP16499 860 aa9.61□□□□□ -0.87
SFPQ-202ENST00000460428 MCM4P33991 863 aa9.61□□□□□ -0.87
SFPQ-202ENST00000460428 BCAMP50895 628 aa9.61□□□□□ -0.87
SFPQ-202ENST00000460428 MAP3K12Q12852 859 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms