RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 A0A087WWV3 80 aa21.38■■□□□ 1.01
HPS3-202ENST00000460120 IFIT5Q13325 482 aaKnown RBP21.38■■□□□ 1.01
HPS3-202ENST00000460120 ANO6Q4KMQ2 910 aa21.38■■□□□ 1.01
HPS3-202ENST00000460120 FBXW7Q969H0 707 aa21.38■■□□□ 1.01
HPS3-202ENST00000460120 ISCA1Q9BUE6 129 aa21.38■■□□□ 1.01
HPS3-202ENST00000460120 BTG4Q9NY30 223 aa21.38■■□□□ 1.01
HPS3-202ENST00000460120 MRVI1Q9Y6F6 885 aa21.38■■□□□ 1.01
HPS3-202ENST00000460120 METTL24Q5JXM2 366 aa21.37■■□□□ 1.01
HPS3-202ENST00000460120 DSCC1Q9BVC3 393 aa21.37■■□□□ 1.01
HPS3-202ENST00000460120 KAT6BQ8WYB5 2073 aa21.37■■□□□ 1.01
HPS3-202ENST00000460120 PFKFB2O60825 505 aa21.37■■□□□ 1.01
HPS3-202ENST00000460120 HSP90AA2PQ14568 343 aaPredicted RBP21.36■■□□□ 1.01
HPS3-202ENST00000460120 NKX1-1Q15270 411 aaPredicted RBP21.36■■□□□ 1.01
HPS3-202ENST00000460120 ARID3AQ99856 593 aa21.36■■□□□ 1.01
HPS3-202ENST00000460120 PUS7LQ9H0K6 701 aaKnown RBP21.36■■□□□ 1.01
HPS3-202ENST00000460120 GREM2Q9H772 168 aa21.36■■□□□ 1.01
HPS3-202ENST00000460120 GPR108Q9NPR9 543 aa21.36■■□□□ 1.01
HPS3-202ENST00000460120 RFX7Q2KHR2 1363 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 ELP1O95163 1332 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 UQCRHLA0A096LP55 91 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 UQCRHP07919 91 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 TPM2P07951 284 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 LDHAL6AQ6ZMR3 332 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 ERCC4Q92889 916 aaPredicted RBP21.35■■□□□ 1.01
HPS3-202ENST00000460120 SOS2Q07890 1332 aaPredicted RBP21.35■■□□□ 1.01
HPS3-202ENST00000460120 HELBQ8NG08 1087 aaPredicted RBP21.35■■□□□ 1.01
HPS3-202ENST00000460120 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 TBC1D2BQ9UPU7 963 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 CIAO1O76071 339 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 HMGB1P09429 215 aaKnown RBP21.35■■□□□ 1.01
HPS3-202ENST00000460120 PDIA3P30101 505 aaKnown RBP21.35■■□□□ 1.01
HPS3-202ENST00000460120 MCM5P33992 734 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 EXOSC10Q01780 885 aaKnown RBP21.35■■□□□ 1.01
HPS3-202ENST00000460120 DNAJC25Q9H1X3 360 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 CNNM1Q9NRU3 951 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 GJB4Q9NTQ9 266 aa21.35■■□□□ 1.01
HPS3-202ENST00000460120 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
HPS3-202ENST00000460120 ITGA6P23229 1130 aa21.34■■□□□ 1.01
HPS3-202ENST00000460120 DENND2AQ9ULE3 1009 aa21.34■■□□□ 1.01
HPS3-202ENST00000460120 FAM13BQ9NYF5 915 aa21.34■■□□□ 1.01
HPS3-202ENST00000460120 ATP2B3Q16720 1220 aa21.33■■□□□ 1.01
HPS3-202ENST00000460120 FGAP02671 866 aa21.33■■□□□ 1
HPS3-202ENST00000460120 SMARCC2Q8TAQ2 1214 aa21.33■■□□□ 1
HPS3-202ENST00000460120 FAM200AQ8TCP9 573 aa21.33■■□□□ 1
HPS3-202ENST00000460120 USP28Q96RU2 1077 aa21.33■■□□□ 1
HPS3-202ENST00000460120 CBX8Q9HC52 389 aa21.33■■□□□ 1
HPS3-202ENST00000460120 TJP1Q07157 1748 aa21.32■■□□□ 1
HPS3-202ENST00000460120 FOXP2O15409 715 aa21.32■■□□□ 1
HPS3-202ENST00000460120 STARD3NLO95772 234 aa21.32■■□□□ 1
HPS3-202ENST00000460120 APPP05067 770 aa21.32■■□□□ 1
HPS3-202ENST00000460120 SASS6Q6UVJ0 657 aa21.32■■□□□ 1
HPS3-202ENST00000460120 DRC7Q8IY82 874 aa21.32■■□□□ 1
HPS3-202ENST00000460120 CLSTN2Q9H4D0 955 aa21.32■■□□□ 1
HPS3-202ENST00000460120 PODXL2Q9NZ53 605 aa21.32■■□□□ 1
HPS3-202ENST00000460120 AKAP2Q9Y2D5 859 aa21.32■■□□□ 1
HPS3-202ENST00000460120 SNAP23O00161 211 aa21.32■■□□□ 1
HPS3-202ENST00000460120 IDH1O75874 414 aaKnown RBP21.32■■□□□ 1
HPS3-202ENST00000460120 ZBTB38Q8NAP3 1195 aaPredicted RBP21.32■■□□□ 1
HPS3-202ENST00000460120 TRMT112Q9UI30 125 aaKnown RBP21.32■■□□□ 1
HPS3-202ENST00000460120 ABCC6O95255 1503 aa21.32■■□□□ 1
HPS3-202ENST00000460120 ZBTB1Q9Y2K1 713 aa21.31■■□□□ 1
HPS3-202ENST00000460120 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
HPS3-202ENST00000460120 IMMTQ16891 758 aaKnown RBP21.31■■□□□ 1
HPS3-202ENST00000460120 CCAR1Q8IX12 1150 aaKnown RBP21.31■■□□□ 1
HPS3-202ENST00000460120 PARP4Q9UKK3 1724 aaKnown RBP21.31■■□□□ 1
HPS3-202ENST00000460120 PRC1O43663 620 aa21.3■■□□□ 1
HPS3-202ENST00000460120 POLR3DP05423 398 aaPredicted RBP21.3■■□□□ 1
HPS3-202ENST00000460120 RXRAP19793 462 aa21.3■■□□□ 1
HPS3-202ENST00000460120 MCAMP43121 646 aa21.3■■□□□ 1
HPS3-202ENST00000460120 SLC4A9Q96Q91 983 aa21.3■■□□□ 1
HPS3-202ENST00000460120 ZMYND15Q9H091 742 aa21.3■■□□□ 1
HPS3-202ENST00000460120 GOLPH3LQ9H4A5 285 aa21.3■■□□□ 1
HPS3-202ENST00000460120 ZSCAN16Q9H4T2 348 aaPredicted RBP21.3■■□□□ 1
HPS3-202ENST00000460120 DDX19AQ9NUU7 478 aaKnown RBP21.3■■□□□ 1
HPS3-202ENST00000460120 CFAP45Q9UL16 551 aa21.3■■□□□ 1
HPS3-202ENST00000460120 KLF18A0A0U1RQI7 1052 aa21.3■■□□□ 1
HPS3-202ENST00000460120 GOLGA8BA8MQT2 603 aa21.3■■□□□ 1
HPS3-202ENST00000460120 GPAA1O43292 621 aa21.3■■□□□ 1
HPS3-202ENST00000460120 ME1P48163 572 aa21.3■■□□□ 1
HPS3-202ENST00000460120 NOLC1Q14978 699 aaKnown RBP eCLIP21.3■■□□□ 1
HPS3-202ENST00000460120 PYCARDQ9ULZ3 195 aa21.3■■□□□ 1
HPS3-202ENST00000460120 PDIA4P13667 645 aaKnown RBP21.29■■□□□ 1
HPS3-202ENST00000460120 NLRP10Q86W26 655 aa21.29■■□□□ 1
HPS3-202ENST00000460120 NUP188Q5SRE5 1749 aa21.29■■□□□ 1
HPS3-202ENST00000460120 IRS4O14654 1257 aaPredicted RBP21.29■■□□□ 1
HPS3-202ENST00000460120 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
HPS3-202ENST00000460120 STK11IPQ8N1F8 1099 aa21.29■■□□□ 1
HPS3-202ENST00000460120 TSC1Q92574 1164 aa21.29■■□□□ 1
HPS3-202ENST00000460120 KCNF1Q9H3M0 494 aa21.29■■□□□ 1
HPS3-202ENST00000460120 MAP3K15Q6ZN16 1313 aa21.29■■□□□ 1
HPS3-202ENST00000460120 PTGS1P23219 599 aa21.28■■□□□ 1
HPS3-202ENST00000460120 SLC9C2Q5TAH2 1124 aa21.28■■□□□ 1
HPS3-202ENST00000460120 GIGYF2Q6Y7W6 1299 aaKnown RBP21.28■■□□□ 1
HPS3-202ENST00000460120 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
HPS3-202ENST00000460120 NKX2-3Q8TAU0 364 aa21.28■■□□□ 1
HPS3-202ENST00000460120 LLPHQ9BRT6 129 aaKnown RBP21.28■■□□□ 1
HPS3-202ENST00000460120 RALYLQ86SE5 291 aaKnown RBP21.28■■□□□ 1
HPS3-202ENST00000460120 CCDC144CPQ8IYA2 1237 aa21.28■■□□□ 1
HPS3-202ENST00000460120 TRIM5Q9C035 493 aa21.28■■□□□ 1
HPS3-202ENST00000460120 TNS2Q63HR2 1409 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms