RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PXDNQ92626 1479 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 CTAGE5O15320 804 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 CCDC144CPQ8IYA2 1237 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 SUCLG2Q96I99 432 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 FSD1Q9BTV5 496 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 CFAP45Q9UL16 551 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 FER1L4A9Z1Z3 1794 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 SPEF2Q9C093 1822 aa9.99□□□□□ -0.81
VPS50-208ENST00000458707 ABCC6O95255 1503 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 CWF19L2Q2TBE0 894 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 NUTM2GQ5VZR2 741 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 ZNF589Q86UQ0 364 aaPredicted RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 LRRC8AQ8IWT6 810 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 SMARCC2Q8TAQ2 1214 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 BICD2Q8TD16 824 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 TCEANC2Q96MN5 208 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 LLPHQ9BRT6 129 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 CCDC8Q9H0W5 538 aaPredicted RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 BICC1Q9H694 974 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 TLR7Q9NYK1 1049 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 DDX41Q9UJV9 622 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 COL15A1P39059 1388 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 RNMTO43148 476 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 ADD1P35611 737 aaKnown RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 GABPB1Q06547 395 aaPredicted RBP9.98□□□□□ -0.81
VPS50-208ENST00000458707 PROSER3Q2NL68 480 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 CCDC112Q8NEF3 446 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 BRF1Q92994 677 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 BOLA2Q9H3K6 86 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 RCOR1Q9UKL0 485 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
VPS50-208ENST00000458707 MYH7P12883 1935 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 JAK2O60674 1132 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 PSEN1P49768 467 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 STX1AQ16623 288 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 TPD52L1Q16890 204 aaPredicted RBP9.97□□□□□ -0.81
VPS50-208ENST00000458707 AMOTQ4VCS5 1084 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 PLEKHO1Q53GL0 409 aaPredicted RBP9.97□□□□□ -0.81
VPS50-208ENST00000458707 ATL3Q6DD88 541 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 NAA16Q6N069 864 aaPredicted RBP9.97□□□□□ -0.81
VPS50-208ENST00000458707 ZNF530Q6P9A1 599 aaPredicted RBP9.97□□□□□ -0.81
VPS50-208ENST00000458707 NEK1Q96PY6 1258 aa9.97□□□□□ -0.81
VPS50-208ENST00000458707 RGS17Q9UGC6 210 aaPredicted RBP9.97□□□□□ -0.81
VPS50-208ENST00000458707 MORC2Q9Y6X9 1032 aaPredicted RBP9.97□□□□□ -0.81
VPS50-208ENST00000458707 LAMB4A4D0S4 1761 aa9.96□□□□□ -0.81
VPS50-208ENST00000458707 KIF1AQ12756 1690 aa9.96□□□□□ -0.81
VPS50-208ENST00000458707 DDX58O95786 925 aaKnown RBP9.96□□□□□ -0.81
VPS50-208ENST00000458707 ATP5JP18859 108 aa9.96□□□□□ -0.81
VPS50-208ENST00000458707 STK3Q13188 491 aa9.96□□□□□ -0.81
VPS50-208ENST00000458707 CEP135Q66GS9 1140 aa9.96□□□□□ -0.81
VPS50-208ENST00000458707 C11orf57Q6ZUT1 292 aaPredicted RBP9.96□□□□□ -0.81
VPS50-208ENST00000458707 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.81
VPS50-208ENST00000458707 DDX21Q9NR30 783 aaKnown RBP eCLIP9.96□□□□□ -0.81
VPS50-208ENST00000458707 SLIT3O75094 1523 aa9.96□□□□□ -0.81
VPS50-208ENST00000458707 ZNF609O15014 1411 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 STRCQ7RTU9 1775 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 GOLGA6L19H0YKK7 550 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 TOM1O60784 492 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 PFKFB2O60825 505 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 PIP4K2BP78356 416 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 SNW1Q13573 536 aaKnown RBP9.96□□□□□ -0.82
VPS50-208ENST00000458707 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 Q6ZUG5 572 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 FAM53CQ9NYF3 392 aa9.96□□□□□ -0.82
VPS50-208ENST00000458707 NWD2Q9ULI1 1742 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 CCZ1BP86790 482 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 CCZ1P86791 482 aaPredicted RBP9.95□□□□□ -0.82
VPS50-208ENST00000458707 PDIA6Q15084 440 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 DHX40Q8IX18 779 aaKnown RBP9.95□□□□□ -0.82
VPS50-208ENST00000458707 ENGASEQ8NFI3 743 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 KIF18AQ8NI77 898 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 YY1AP1Q9H869 796 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 COPRSQ9NQ92 184 aa9.95□□□□□ -0.82
VPS50-208ENST00000458707 ECM29Q5VYK3 1845 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 H3BQV1 296 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 SCRN1Q12765 414 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 IFFO2Q5TF58 517 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 CCAR1Q8IX12 1150 aaKnown RBP9.94□□□□□ -0.82
VPS50-208ENST00000458707 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
VPS50-208ENST00000458707 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 NSUN7Q8NE18 718 aaKnown RBP9.94□□□□□ -0.82
VPS50-208ENST00000458707 ZNF397Q8NF99 534 aaPredicted RBP9.94□□□□□ -0.82
VPS50-208ENST00000458707 AGXT2Q9BYV1 514 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 SALL1Q9NSC2 1324 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 C4AP0C0L4 1744 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 C4BP0C0L5 1744 aa9.94□□□□□ -0.82
VPS50-208ENST00000458707 TRPM3Q9HCF6 1732 aaPredicted RBP9.94□□□□□ -0.82
VPS50-208ENST00000458707 USP27XA6NNY8 438 aa9.93□□□□□ -0.82
VPS50-208ENST00000458707 KIF2AO00139 706 aaPredicted RBP9.93□□□□□ -0.82
VPS50-208ENST00000458707 CYP21A2P08686 494 aa9.93□□□□□ -0.82
VPS50-208ENST00000458707 HMGB1P09429 215 aaKnown RBP9.93□□□□□ -0.82
VPS50-208ENST00000458707 SKILP12757 684 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms