RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 IQCB1Q15051 598 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 SMAP1Q8IYB5 467 aaPredicted RBP16.63■□□□□ 0.25
SCFD1-203ENST00000458591 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
SCFD1-203ENST00000458591 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCFD1-203ENST00000458591 PPP4R3BQ5MIZ7 849 aa16.62■□□□□ 0.25
SCFD1-203ENST00000458591 CCDC94Q9BW85 323 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-203ENST00000458591 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
SCFD1-203ENST00000458591 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
SCFD1-203ENST00000458591 FDPSP14324 419 aaKnown RBP16.62■□□□□ 0.25
SCFD1-203ENST00000458591 PDIA3P30101 505 aaKnown RBP16.62■□□□□ 0.25
SCFD1-203ENST00000458591 ADORA1P30542 326 aa16.62■□□□□ 0.25
SCFD1-203ENST00000458591 OSBP2Q969R2 916 aa16.62■□□□□ 0.25
SCFD1-203ENST00000458591 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
SCFD1-203ENST00000458591 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 A0A1B0GUL7 405 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 ZSCAN16Q9H4T2 348 aaPredicted RBP16.61■□□□□ 0.25
SCFD1-203ENST00000458591 RCOR1Q9UKL0 485 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
SCFD1-203ENST00000458591 TRPM3Q9HCF6 1732 aaPredicted RBP16.61■□□□□ 0.25
SCFD1-203ENST00000458591 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
SCFD1-203ENST00000458591 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
SCFD1-203ENST00000458591 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
SCFD1-203ENST00000458591 A0A1B0GVL5 298 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 FOXP2O15409 715 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 ME1P48163 572 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
SCFD1-203ENST00000458591 SCARF1Q14162 830 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 HELLSQ9NRZ9 838 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 POLR3DP05423 398 aaPredicted RBP16.59■□□□□ 0.25
SCFD1-203ENST00000458591 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
SCFD1-203ENST00000458591 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
SCFD1-203ENST00000458591 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.25
SCFD1-203ENST00000458591 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.25
SCFD1-203ENST00000458591 DSCC1Q9BVC3 393 aa16.58■□□□□ 0.25
SCFD1-203ENST00000458591 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.25
SCFD1-203ENST00000458591 EYA2O00167 538 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 TNNT1P13805 278 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.24
SCFD1-203ENST00000458591 FILIP1Q7Z7B0 1213 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 DHX40Q8IX18 779 aaKnown RBP16.58■□□□□ 0.24
SCFD1-203ENST00000458591 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 ZNF592Q92610 1267 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 PCDHA7Q9UN72 937 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
SCFD1-203ENST00000458591 AFDNP55196 1824 aaKnown RBP16.58■□□□□ 0.24
SCFD1-203ENST00000458591 GOLGA6L19H0YKK7 550 aa16.57■□□□□ 0.24
SCFD1-203ENST00000458591 U2AF2P26368 475 aaKnown RBP eCLIP16.57■□□□□ 0.242e-8■■■■□ 20.1
SCFD1-203ENST00000458591 WASHC4Q2M389 1173 aa16.57■□□□□ 0.24
SCFD1-203ENST00000458591 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
SCFD1-203ENST00000458591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.57■□□□□ 0.242e-8■■■□□ 14.9
SCFD1-203ENST00000458591 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
SCFD1-203ENST00000458591 AGXT2Q9BYV1 514 aa16.57■□□□□ 0.24
SCFD1-203ENST00000458591 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
SCFD1-203ENST00000458591 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
SCFD1-203ENST00000458591 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
SCFD1-203ENST00000458591 AOPEPQ8N6M6 819 aa16.56■□□□□ 0.24
SCFD1-203ENST00000458591 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
SCFD1-203ENST00000458591 CARMIL3Q8ND23 1372 aa16.56■□□□□ 0.24
SCFD1-203ENST00000458591 HMGB1P09429 215 aaKnown RBP16.56■□□□□ 0.24
SCFD1-203ENST00000458591 LRRC8AQ8IWT6 810 aa16.56■□□□□ 0.24
SCFD1-203ENST00000458591 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
SCFD1-203ENST00000458591 TRMT1Q9NXH9 659 aaKnown RBP16.56■□□□□ 0.24
SCFD1-203ENST00000458591 PRDM4Q9UKN5 801 aa16.56■□□□□ 0.24
SCFD1-203ENST00000458591 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 NDUFA8P51970 172 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 STX1AQ16623 288 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 ISM2Q6H9L7 571 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 BECN2A8MW95 431 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 BIN1O00499 593 aa16.55■□□□□ 0.24
SCFD1-203ENST00000458591 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
SCFD1-203ENST00000458591 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.55■□□□□ 0.24
SCFD1-203ENST00000458591 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
SCFD1-203ENST00000458591 KIF28PB7ZC32 967 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 CTIFO43310 598 aaKnown RBP16.54■□□□□ 0.24
SCFD1-203ENST00000458591 FGAP02671 866 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 ATF3P18847 181 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 ZAP70P43403 619 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 NCBP1Q09161 790 aaKnown RBP16.54■□□□□ 0.24
SCFD1-203ENST00000458591 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 AIFM3Q96NN9 605 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
SCFD1-203ENST00000458591 RXRAP19793 462 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 ANKRD7Q92527 254 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 XAGE2Q96GT9 111 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 ANTXR2P58335 489 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
SCFD1-203ENST00000458591 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
SCFD1-203ENST00000458591 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
SCFD1-203ENST00000458591 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
SCFD1-203ENST00000458591 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms