RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SPDL1Q96EA4 605 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
LINC00342-202ENST00000448494 ZCCHC11Q5TAX3 1644 aaKnown RBP12.32□□□□□ -0.44
LINC00342-202ENST00000448494 KIAA0754O94854 1291 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 ECEL1O95672 775 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00342-202ENST00000448494 YTHDF3Q7Z739 585 aaKnown RBP12.32□□□□□ -0.44
LINC00342-202ENST00000448494 PLEKHG4BQ96PX9 1271 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
LINC00342-202ENST00000448494 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 AHCYL1O43865 530 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 RNF40O75150 1001 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 EXOSC9Q06265 439 aaKnown RBP12.32□□□□□ -0.44
LINC00342-202ENST00000448494 CASP8Q14790 479 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 TTLL7Q6ZT98 887 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 SPATA21Q7Z572 469 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 MFN1Q8IWA4 741 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 SIRT2Q8IXJ6 389 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 FBXO41Q8TF61 875 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 MAF1Q9H063 256 aa12.32□□□□□ -0.44
LINC00342-202ENST00000448494 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
LINC00342-202ENST00000448494 RASSF9O75901 435 aa12.31□□□□□ -0.44
LINC00342-202ENST00000448494 PRPF6O94906 941 aaKnown RBP12.31□□□□□ -0.44
LINC00342-202ENST00000448494 FESP07332 822 aa12.31□□□□□ -0.44
LINC00342-202ENST00000448494 KIF4BQ2VIQ3 1234 aa12.31□□□□□ -0.44
LINC00342-202ENST00000448494 LMBR1Q8WVP7 490 aa12.31□□□□□ -0.44
LINC00342-202ENST00000448494 EZH1Q92800 747 aaPredicted RBP12.31□□□□□ -0.44
LINC00342-202ENST00000448494 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
LINC00342-202ENST00000448494 RSRC1Q96IZ7 334 aaKnown RBP12.31□□□□□ -0.44
LINC00342-202ENST00000448494 NAT10Q9H0A0 1025 aaKnown RBP12.31□□□□□ -0.44
LINC00342-202ENST00000448494 DACT1Q9NYF0 836 aa12.31□□□□□ -0.44
LINC00342-202ENST00000448494 GOLGA6L9A6NEM1 432 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 PYGLP06737 847 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 SLC8A1P32418 973 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 SF3B2Q13435 895 aaKnown RBP12.3□□□□□ -0.44
LINC00342-202ENST00000448494 SNCBQ16143 134 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 MYOM1P52179 1685 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 RNF17Q9BXT8 1623 aaKnown RBP12.3□□□□□ -0.44
LINC00342-202ENST00000448494 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 FANCGO15287 622 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 ZSCAN9O15535 394 aaPredicted RBP12.3□□□□□ -0.44
LINC00342-202ENST00000448494 ZSCAN12O43309 604 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 GBP2P32456 591 aaPredicted RBP12.3□□□□□ -0.44
LINC00342-202ENST00000448494 KRT85P78386 507 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 ATP2B2Q01814 1243 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 ARMCX5Q6P1M9 558 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 HOOK2Q96ED9 719 aa12.3□□□□□ -0.44
LINC00342-202ENST00000448494 ZNF396Q96N95 335 aaPredicted RBP12.3□□□□□ -0.44
LINC00342-202ENST00000448494 CDHR2Q9BYE9 1310 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 PEX19P40855 299 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 LAMB3Q13751 1172 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 KCNB1Q14721 858 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 OSBPL9Q96SU4 736 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 SLX1AQ9BQ83 275 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00342-202ENST00000448494 FANCAO15360 1455 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 FRMD3A2A2Y4 597 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 BECN2A8MW95 431 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 MEFVO15553 781 aaPredicted RBP12.29□□□□□ -0.44
LINC00342-202ENST00000448494 SKAP2O75563 359 aaPredicted RBP12.29□□□□□ -0.44
LINC00342-202ENST00000448494 IRAK1P51617 712 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 CDR1P51861 262 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 STX1AQ16623 288 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 NOL8Q76FK4 1167 aaKnown RBP12.29□□□□□ -0.44
LINC00342-202ENST00000448494 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
LINC00342-202ENST00000448494 ANKZF1Q9H8Y5 726 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 ABCB6Q9NP58 842 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 MTMR6Q9Y217 621 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
LINC00342-202ENST00000448494 A6NNZ2 444 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 TUBB8Q3ZCM7 444 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 ARMC3Q5W041 872 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 MICALCLQ6ZW33 695 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
LINC00342-202ENST00000448494 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
LINC00342-202ENST00000448494 RANBP17Q9H2T7 1088 aaKnown RBP12.28□□□□□ -0.44
LINC00342-202ENST00000448494 VCPKMTQ9H867 229 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 TTC21AQ8NDW8 1320 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 PHACTR2O75167 634 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 PYGBP11216 843 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 CCDC40Q4G0X9 1142 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 MYLK4Q86YV6 388 aaPredicted RBP12.28□□□□□ -0.44
LINC00342-202ENST00000448494 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
LINC00342-202ENST00000448494 CDC42BPAQ5VT25 1732 aa12.27□□□□□ -0.44
LINC00342-202ENST00000448494 CWF19L1Q69YN2 538 aaKnown RBP12.27□□□□□ -0.44
LINC00342-202ENST00000448494 CAPRIN2Q6IMN6 1127 aaKnown RBP12.27□□□□□ -0.44
LINC00342-202ENST00000448494 CEP57Q86XR8 500 aa12.27□□□□□ -0.44
LINC00342-202ENST00000448494 B4GALNT2Q8NHY0 566 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms