RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 DYRK1BQ9Y463 629 aa9.17□□□□□ -0.94
COL11A1-205ENST00000447608 TRPA1O75762 1119 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 PRR20EP86478 221 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 PRR20CP86479 221 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 PRR20DP86480 221 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 PRR20BP86481 221 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 PRR20AP86496 221 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 GOLM1Q8NBJ4 401 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 HNRNPLLQ8WVV9 542 aaKnown RBP9.16□□□□□ -0.94
COL11A1-205ENST00000447608 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 SRPK1Q96SB4 655 aaKnown RBP9.16□□□□□ -0.94
COL11A1-205ENST00000447608 TRIM55Q9BYV6 548 aa9.16□□□□□ -0.94
COL11A1-205ENST00000447608 SOS2Q07890 1332 aaPredicted RBP9.15□□□□□ -0.94
COL11A1-205ENST00000447608 A0A0G2JS52 829 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 HSD3B2P26439 372 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 GRIA4P48058 902 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 CAMK2GQ13555 558 aaPredicted RBP9.15□□□□□ -0.94
COL11A1-205ENST00000447608 COL9A2Q14055 689 aaPredicted RBP9.15□□□□□ -0.94
COL11A1-205ENST00000447608 RAB33AQ14088 237 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 EFHC2Q5JST6 749 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 SNAP47Q5SQN1 464 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
COL11A1-205ENST00000447608 ATXN7O15265 892 aaPredicted RBP9.14□□□□□ -0.95
COL11A1-205ENST00000447608 GRIN2CQ14957 1233 aa9.14□□□□□ -0.95
COL11A1-205ENST00000447608 SPRED3Q2MJR0 410 aa9.14□□□□□ -0.95
COL11A1-205ENST00000447608 PCNX4Q63HM2 1172 aa9.14□□□□□ -0.95
COL11A1-205ENST00000447608 CEP44Q9C0F1 390 aa9.14□□□□□ -0.95
COL11A1-205ENST00000447608 METTL12A8MUP2 240 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 ENC1O14682 589 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
COL11A1-205ENST00000447608 EFSO43281 561 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 CLSTN1O94985 981 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 KIF4AO95239 1232 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 PSAPP07602 524 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 FAM157BP0CG42 384 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 NFKB1P19838 968 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 CRKP46108 304 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 LMNB2Q03252 620 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 APOBRQ0VD83 1088 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 HYAL2Q12891 473 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 SCARF1Q14162 830 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 NKD1Q969G9 470 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 PNMA5Q96PV4 448 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 ZFYVE1Q9HBF4 777 aa9.13□□□□□ -0.95
COL11A1-205ENST00000447608 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
COL11A1-205ENST00000447608 DCDC2BA2VCK2 349 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 KHNYNO15037 678 aaKnown RBP9.12□□□□□ -0.95
COL11A1-205ENST00000447608 BMP1P13497 986 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 TFE3P19532 575 aaPredicted RBP9.12□□□□□ -0.95
COL11A1-205ENST00000447608 CCDC81Q6ZN84 652 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 CEP120Q8N960 986 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
COL11A1-205ENST00000447608 NECAB3Q96P71 396 aaPredicted RBP9.12□□□□□ -0.95
COL11A1-205ENST00000447608 HHIPQ96QV1 700 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
COL11A1-205ENST00000447608 STRN4Q9NRL3 753 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 DZANK1Q9NVP4 752 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 PRKAG3Q9UGI9 489 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.12□□□□□ -0.95
COL11A1-205ENST00000447608 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
COL11A1-205ENST00000447608 FAM221BA6H8Z2 402 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 PAGE1O75459 146 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 THBS1P07996 1170 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 ITPKAP23677 461 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 PTPROQ16827 1216 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 AGMOQ6ZNB7 445 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 R3HCC1Q9Y3T6 440 aaKnown RBP9.11□□□□□ -0.95
COL11A1-205ENST00000447608 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
COL11A1-205ENST00000447608 CCDC85CA6NKD9 419 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 SMAD7O15105 426 aaKnown RBP9.1□□□□□ -0.95
COL11A1-205ENST00000447608 SOX18P35713 384 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 RASA3Q14644 834 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 SEZ6Q53EL9 994 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 FAM196AQ6ZSG2 479 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 SLITRK4Q8IW52 837 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 SHDQ96IW2 340 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 DEPDC7Q96QD5 511 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 DNMT3LQ9UJW3 386 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 PPT2Q9UMR5 302 aa9.1□□□□□ -0.95
COL11A1-205ENST00000447608 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 A0A096LPE4 126 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 A0A1W2PPZ6 126 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 NFKBIEO00221 500 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 ENPP3O14638 875 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 TLR3O15455 904 aaKnown RBP9.09□□□□□ -0.95
COL11A1-205ENST00000447608 PLAURQ03405 335 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 TNP2Q05952 138 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 NXPE3Q969Y0 559 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.95
COL11A1-205ENST00000447608 BHLHE41Q9C0J9 482 aaPredicted RBP9.09□□□□□ -0.95
COL11A1-205ENST00000447608 HCN2Q9UL51 889 aa9.09□□□□□ -0.95
COL11A1-205ENST00000447608 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 F13A1P00488 732 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 MAPTP10636 758 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms