RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 CALM3P0DP25 149 aa12.65□□□□□ -0.38
NFRKB-201ENST00000446488 HAND2P61296 217 aa12.65□□□□□ -0.38
NFRKB-201ENST00000446488 USP48Q86UV5 1035 aa12.65□□□□□ -0.38
NFRKB-201ENST00000446488 PYM1Q9BRP8 204 aaKnown RBP12.65□□□□□ -0.38
NFRKB-201ENST00000446488 DDX19AQ9NUU7 478 aaKnown RBP12.65□□□□□ -0.38
NFRKB-201ENST00000446488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■□□□ 12.8
NFRKB-201ENST00000446488 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 CETN1Q12798 172 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 OTUD7BQ6GQQ9 843 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 CCDC102AQ96A19 550 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 TESK2Q96S53 571 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 A1BGP04217 495 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 LIG1P18858 919 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 CWF19L2Q2TBE0 894 aaKnown RBP12.64□□□□□ -0.39
NFRKB-201ENST00000446488 SEPT11Q9NVA2 429 aaKnown RBP12.64□□□□□ -0.39
NFRKB-201ENST00000446488 LIMCH1Q9UPQ0 1083 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 AFF2P51816 1311 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 ARHGEF5Q12774 1597 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 DCPSQ96C86 337 aaKnown RBP12.64□□□□□ -0.39
NFRKB-201ENST00000446488 ZKSCAN5Q9Y2L8 839 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 PAXBP1Q9Y5B6 917 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 SIK1P57059 783 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 PAG1Q9NWQ8 432 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 ZHX1Q9UKY1 873 aaPredicted RBP12.64□□□□□ -0.39
NFRKB-201ENST00000446488 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
NFRKB-201ENST00000446488 MICU3Q86XE3 530 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 SULF1Q8IWU6 871 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 PHKG2P15735 406 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 GSDMDP57764 484 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 MEIS3Q99687 375 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 HECW2Q9P2P5 1572 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 IL13P35225 146 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 CCDC181Q5TID7 509 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 C16orf45Q96MC5 204 aaPredicted RBP12.63□□□□□ -0.39
NFRKB-201ENST00000446488 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 CAVIN2O95810 425 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 CETN2P41208 172 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
NFRKB-201ENST00000446488 GPHNQ9NQX3 736 aaPredicted RBP12.63□□□□□ -0.39
NFRKB-201ENST00000446488 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
NFRKB-201ENST00000446488 C6orf50Q9HD87 102 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 KDM5CP41229 1560 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 EYA2O00167 538 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 UBE2HP62256 183 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 ERLIN2O94905 339 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 NUCB1Q02818 461 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 DCAF15Q66K64 600 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
NFRKB-201ENST00000446488 SKIDA1Q1XH10 827 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 TMC4Q7Z404 712 aa12.62□□□□□ -0.39
NFRKB-201ENST00000446488 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 PABPC4Q13310 644 aaKnown RBP eCLIP12.61□□□□□ -0.398e-12■■■■□ 19.6
NFRKB-201ENST00000446488 BMS1Q14692 1282 aaKnown RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 ZBTB43O43298 467 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 ATP2B4P23634 1241 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 RRP36Q96EU6 259 aaKnown RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 TBCAO75347 108 aaKnown RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 URI1O94763 535 aaPredicted RBP12.61□□□□□ -0.39
NFRKB-201ENST00000446488 BRINP3Q76B58 766 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 USP37Q86T82 979 aa12.61□□□□□ -0.39
NFRKB-201ENST00000446488 GOLGA6L7A0A1B0GV03 622 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 UBA7P41226 1012 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
NFRKB-201ENST00000446488 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
NFRKB-201ENST00000446488 SMCR8Q8TEV9 937 aaPredicted RBP12.6□□□□□ -0.39
NFRKB-201ENST00000446488 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 STX6O43752 255 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 CASQ1P31415 396 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 APBB1IPQ7Z5R6 666 aaPredicted RBP12.6□□□□□ -0.39
NFRKB-201ENST00000446488 SMC5Q8IY18 1101 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 ANKRD44Q8N8A2 993 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 BICD1Q96G01 975 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 AS3MTQ9HBK9 375 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 LGR6Q9HBX8 967 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 TTC41PQ6P2S7 1318 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
NFRKB-201ENST00000446488 BMP15O95972 392 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 JCADQ9P266 1359 aa12.6□□□□□ -0.39
NFRKB-201ENST00000446488 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
NFRKB-201ENST00000446488 RTN1Q16799 776 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms