RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SLC5A1P13866 664 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 RPS6KB1P23443 525 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 CDC5LQ99459 802 aaKnown RBP22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 C4BP0C0L5 1744 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 MAST3O60307 1309 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 A0A1B0GUL6 1792 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 CPA1P15085 419 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 ZAP70P43403 619 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 SCARF1Q14162 830 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 SF3B3Q15393 1217 aaKnown RBP22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 SLC10A5Q5PT55 438 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 SEPT12Q8IYM1 358 aa22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.53■■□□□ 1.2
SEMA3D-202ENST00000444867 CHGBP05060 677 aa22.52■■□□□ 1.2
SEMA3D-202ENST00000444867 BCL2L12Q9HB09 334 aa22.52■■□□□ 1.2
SEMA3D-202ENST00000444867 SEC31BQ9NQW1 1179 aa22.52■■□□□ 1.2
SEMA3D-202ENST00000444867 ZDHHC9Q9Y397 364 aa22.52■■□□□ 1.2
SEMA3D-202ENST00000444867 RTCBQ9Y3I0 505 aaKnown RBP22.52■■□□□ 1.2
SEMA3D-202ENST00000444867 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 LAMA4Q16363 1823 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 GNPATO15228 680 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 BRD1O95696 1058 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 MCAMP43121 646 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 KCNQ4P56696 695 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 CCDC102BQ68D86 513 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 APPBP2Q92624 585 aa22.51■■□□□ 1.19
SEMA3D-202ENST00000444867 ZPR1O75312 459 aa22.5■■□□□ 1.19
SEMA3D-202ENST00000444867 PKP1Q13835 747 aa22.5■■□□□ 1.19
SEMA3D-202ENST00000444867 ERFEQ4G0M1 354 aa22.5■■□□□ 1.19
SEMA3D-202ENST00000444867 BCL11BQ9C0K0 894 aaPredicted RBP22.5■■□□□ 1.19
SEMA3D-202ENST00000444867 DOCK2Q92608 1830 aa22.5■■□□□ 1.19
SEMA3D-202ENST00000444867 NEK1Q96PY6 1258 aa22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 CYP21A2P08686 494 aa22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 HMGB1P09429 215 aaKnown RBP22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 HSPD1P10809 573 aaKnown RBP22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 FAM182BQ5T319 152 aa22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 TBC1D9BQ66K14 1250 aa22.49■■□□□ 1.19
SEMA3D-202ENST00000444867 M0R2C6 588 aa22.48■■□□□ 1.19
SEMA3D-202ENST00000444867 OSBP2Q969R2 916 aa22.48■■□□□ 1.19
SEMA3D-202ENST00000444867 SETDB2Q96T68 719 aa22.48■■□□□ 1.19
SEMA3D-202ENST00000444867 WDR33Q9C0J8 1336 aaKnown RBP22.48■■□□□ 1.19
SEMA3D-202ENST00000444867 PHKA1P46020 1223 aa22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 WASHC4Q2M389 1173 aa22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 HELBQ8NG08 1087 aaPredicted RBP22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 CTNNA3Q9UI47 895 aa22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 TAF6LQ9Y6J9 622 aa22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 MYO5AQ9Y4I1 1855 aaKnown RBP22.47■■□□□ 1.19
SEMA3D-202ENST00000444867 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
SEMA3D-202ENST00000444867 GTF2E1P29083 439 aaPredicted RBP22.46■■□□□ 1.19
SEMA3D-202ENST00000444867 ADD2P35612 726 aa22.46■■□□□ 1.19
SEMA3D-202ENST00000444867 UBE3CQ15386 1083 aa22.46■■□□□ 1.19
SEMA3D-202ENST00000444867 SLFNL1Q499Z3 407 aa22.46■■□□□ 1.19
SEMA3D-202ENST00000444867 LARGE1O95461 756 aa22.45■■□□□ 1.18
SEMA3D-202ENST00000444867 PDIA4P13667 645 aaKnown RBP22.45■■□□□ 1.18
SEMA3D-202ENST00000444867 CHRNDQ07001 517 aa22.45■■□□□ 1.18
SEMA3D-202ENST00000444867 PI16Q6UXB8 463 aa22.45■■□□□ 1.18
SEMA3D-202ENST00000444867 SRP68Q9UHB9 627 aaKnown RBP22.45■■□□□ 1.18
SEMA3D-202ENST00000444867 ADRA2BP18089 450 aa22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 ME3Q16798 604 aa22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 ILDR2Q71H61 639 aa22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 CCDC83Q8IWF9 413 aa22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 ARHGEF1Q92888 912 aaKnown RBP22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 BSDC1Q9NW68 430 aaPredicted RBP22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 TPCN1Q9ULQ1 816 aa22.44■■□□□ 1.18
SEMA3D-202ENST00000444867 TOB2Q14106 344 aaPredicted RBP22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 MCTP1Q6DN14 999 aa22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 TPTE2Q6XPS3 522 aa22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 BICDL1Q6ZP65 573 aa22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 NBPF5PQ86XG9 351 aaPredicted RBP22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 SPATA5Q8NB90 893 aa22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 PIH1D3Q9NQM4 214 aaKnown RBP22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 EP400Q96L91 3159 aa22.43■■□□□ 1.18
SEMA3D-202ENST00000444867 TRAPPC3LQ5T215 181 aa22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 FAM196AQ6ZSG2 479 aa22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 NLRP3Q96P20 1036 aa22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 LARP6Q9BRS8 491 aaKnown RBP22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 COL4A1P02462 1669 aa22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 HMGB2P26583 209 aaKnown RBP22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 RFC4P35249 363 aa22.42■■□□□ 1.18
SEMA3D-202ENST00000444867 TAF1P21675 1872 aa22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 UBE4AQ14139 1066 aa22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 SLC9C2Q5TAH2 1124 aa22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 STOX1Q6ZVD7 989 aa22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 C3orf67Q6ZVT6 689 aa22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 DHX32Q7L7V1 743 aaKnown RBP22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 PUS7LQ9H0K6 701 aaKnown RBP22.41■■□□□ 1.18
SEMA3D-202ENST00000444867 GPAA1O43292 621 aa22.4■■□□□ 1.18
SEMA3D-202ENST00000444867 KLHL40Q2TBA0 621 aa22.4■■□□□ 1.18
SEMA3D-202ENST00000444867 SLC27A3Q5K4L6 730 aa22.4■■□□□ 1.18
SEMA3D-202ENST00000444867 E7EWF7 191 aa22.39■■□□□ 1.18
SEMA3D-202ENST00000444867 IDH1O75874 414 aaKnown RBP22.39■■□□□ 1.18
SEMA3D-202ENST00000444867 ST3GAL1Q11201 340 aa22.39■■□□□ 1.18
SEMA3D-202ENST00000444867 RASGRF1Q13972 1273 aa22.39■■□□□ 1.18
SEMA3D-202ENST00000444867 IMMTQ16891 758 aaKnown RBP22.39■■□□□ 1.18
SEMA3D-202ENST00000444867 SMIM5Q71RC9 77 aa22.39■■□□□ 1.18
SEMA3D-202ENST00000444867 LMBRD1Q9NUN5 540 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms