RNA–Protein interactions for RNA: ENST00000442736.2

IGKV1D-35-201, Transcript of immunoglobulin kappa variable 1D-35 (pseudogene), humanhuman

BASIC

Gene IGKV1D-35, Length 271 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-35-201ENST00000442736 LDLRAD1Q5T700 205 aa11.3□□□□□ -0.6
IGKV1D-35-201ENST00000442736 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
IGKV1D-35-201ENST00000442736 CFAP53Q96M91 514 aa11.3□□□□□ -0.6
IGKV1D-35-201ENST00000442736 ZBTB3Q9H5J0 574 aa11.3□□□□□ -0.6
IGKV1D-35-201ENST00000442736 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
IGKV1D-35-201ENST00000442736 MAP3K15Q6ZN16 1313 aa11.3□□□□□ -0.6
IGKV1D-35-201ENST00000442736 TNFRSF10AO00220 468 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 BMP8BP34820 402 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 GJA8P48165 433 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 MAP3K12Q12852 859 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 GRAPQ13588 217 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 OTUD7BQ6GQQ9 843 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 MAFAQ8NHW3 353 aaPredicted RBP11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 GRAPLQ8TC17 118 aaPredicted RBP11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 PTPN18Q99952 460 aa11.29□□□□□ -0.6
IGKV1D-35-201ENST00000442736 SNRPA1P09661 255 aaKnown RBP11.28□□□□□ -0.6
IGKV1D-35-201ENST00000442736 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
IGKV1D-35-201ENST00000442736 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
IGKV1D-35-201ENST00000442736 POLLQ9UGP5 575 aa11.28□□□□□ -0.6
IGKV1D-35-201ENST00000442736 NSFL1CQ9UNZ2 370 aaKnown RBP11.28□□□□□ -0.6
IGKV1D-35-201ENST00000442736 GNAT3A8MTJ3 354 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ERVV-1B6SEH8 477 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GJB1P08034 283 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 USP17L8P0C7I0 530 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 CCL5P13501 91 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GJA5P36382 358 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.61
IGKV1D-35-201ENST00000442736 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 SYN1P17600 705 aa11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 MAGEA10P43363 369 aaPredicted RBP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 HNRNPUQ00839 825 aaKnown RBP eCLIP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 WDR43Q15061 677 aaKnown RBP eCLIP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 TAF1CQ15572 869 aaPredicted RBP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 PPP1R42Q7Z4L9 355 aa11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 U2AF1L4Q8WU68 220 aaKnown RBP11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RNF208Q9H0X6 261 aa11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ZBED9Q6R2W3 1325 aa11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 CEMIPQ8WUJ3 1361 aa11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 CACNA1AO00555 2505 aa11.26□□□□□ -0.61
IGKV1D-35-201ENST00000442736 SASH1O94885 1247 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GPSM2P81274 684 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ZNF34Q8IZ26 560 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 EYA3Q99504 573 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
IGKV1D-35-201ENST00000442736 G3V3G9 751 aa11.24□□□□□ -0.61
IGKV1D-35-201ENST00000442736 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GMLQ99445 158 aa11.24□□□□□ -0.61
IGKV1D-35-201ENST00000442736 UBE2OQ9C0C9 1292 aaKnown RBP11.24□□□□□ -0.61
IGKV1D-35-201ENST00000442736 WNT10BO00744 389 aa11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GRK4P32298 578 aa11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 LACTBP83111 547 aaPredicted RBP11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 KIF22Q14807 665 aa11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ZFYVE28Q9HCC9 887 aa11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 SYNGAP1Q96PV0 1343 aa11.23□□□□□ -0.61
IGKV1D-35-201ENST00000442736 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 MGAMO43451 1857 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 COL2A1P02458 1487 aaPredicted RBP11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 MYL6BP14649 208 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 PARP10Q53GL7 1025 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ZNF521Q96K83 1311 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 CDX2Q99626 313 aaPredicted RBP11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 UNC93B1Q9H1C4 597 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RIPOR2Q9Y4F9 1068 aa11.22□□□□□ -0.61
IGKV1D-35-201ENST00000442736 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 COL1A1P02452 1464 aaPredicted RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 TJAP1Q5JTD0 557 aa11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ZNF697Q5TEC3 545 aa11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 APOBEC3FQ8IUX4 373 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RAET1EQ8TD07 263 aa11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 DIS3LQ8TF46 1054 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 NECTIN2Q92692 538 aa11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 CELF1Q92879 486 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 RRP7AQ9Y3A4 280 aaKnown RBP11.21□□□□□ -0.61
IGKV1D-35-201ENST00000442736 UFL1O94874 794 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms