RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CCZ1P86791 482 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-218ENST00000442625 TNNI3KQ59H18 835 aa16.53■□□□□ 0.24
MCF2L-218ENST00000442625 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
MCF2L-218ENST00000442625 DHX40Q8IX18 779 aaKnown RBP16.53■□□□□ 0.24
MCF2L-218ENST00000442625 NFATC2IPQ8NCF5 419 aa16.53■□□□□ 0.24
MCF2L-218ENST00000442625 FPGT-TNNI3KV9GXZ4 949 aa16.53■□□□□ 0.24
MCF2L-218ENST00000442625 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
MCF2L-218ENST00000442625 APOBRQ0VD83 1088 aa16.52■□□□□ 0.24
MCF2L-218ENST00000442625 STOX1Q6ZVD7 989 aa16.52■□□□□ 0.24
MCF2L-218ENST00000442625 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.24
MCF2L-218ENST00000442625 ZNF609O15014 1411 aa16.52■□□□□ 0.24
MCF2L-218ENST00000442625 ERICH4A6NGS2 130 aa16.52■□□□□ 0.23
MCF2L-218ENST00000442625 ZC3H6P61129 1189 aaKnown RBP16.52■□□□□ 0.23
MCF2L-218ENST00000442625 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.23
MCF2L-218ENST00000442625 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
MCF2L-218ENST00000442625 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-218ENST00000442625 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 ERBB3P21860 1342 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 PTPN21Q16825 1174 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
MCF2L-218ENST00000442625 ZNF622Q969S3 477 aaKnown RBP eCLIP16.51■□□□□ 0.23
MCF2L-218ENST00000442625 ZNF496Q96IT1 587 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-218ENST00000442625 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-218ENST00000442625 BIN1O00499 593 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 ATP5JP18859 108 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 ME1P48163 572 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 STX1AQ16623 288 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 ISM2Q6H9L7 571 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-218ENST00000442625 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-218ENST00000442625 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 A0A1B0GVL5 298 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 RBM6P78332 1123 aaKnown RBP16.5■□□□□ 0.23
MCF2L-218ENST00000442625 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 FSIP1Q8NA03 581 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 JCADQ9P266 1359 aa16.5■□□□□ 0.23
MCF2L-218ENST00000442625 APPP05067 770 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-218ENST00000442625 KRT32Q14532 448 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
MCF2L-218ENST00000442625 ZNF446Q9NWS9 450 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 ADGRL3Q9HAR2 1447 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 SYCP1Q15431 976 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 CFAP45Q9UL16 551 aa16.49■□□□□ 0.23
MCF2L-218ENST00000442625 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 CDC25BP30305 580 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 ERCC6LQ2NKX8 1250 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
MCF2L-218ENST00000442625 MRFAP1L1Q96HT8 127 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
MCF2L-218ENST00000442625 CCDC73Q6ZRK6 1079 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 ZNF397Q8NF99 534 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-218ENST00000442625 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-218ENST00000442625 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
MCF2L-218ENST00000442625 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
MCF2L-218ENST00000442625 A0A087WZG4 1122 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-218ENST00000442625 TERF2Q15554 542 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 SARM1Q6SZW1 724 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 ILDR1Q86SU0 546 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-218ENST00000442625 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-218ENST00000442625 GOLIM4O00461 696 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 SYT10Q6XYQ8 523 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 KRT222Q8N1A0 295 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 SMC2O95347 1197 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 RCOR1Q9UKL0 485 aa16.47■□□□□ 0.23
MCF2L-218ENST00000442625 E4F1Q66K89 784 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-218ENST00000442625 ENGASEQ8NFI3 743 aa16.46■□□□□ 0.23
MCF2L-218ENST00000442625 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
MCF2L-218ENST00000442625 SDF4Q9BRK5 362 aa16.46■□□□□ 0.23
MCF2L-218ENST00000442625 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-218ENST00000442625 TMC6Q7Z403 805 aa16.46■□□□□ 0.22
MCF2L-218ENST00000442625 HAUS7Q99871 368 aa16.46■□□□□ 0.22
MCF2L-218ENST00000442625 POLR3DP05423 398 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-218ENST00000442625 TIMM10P62072 90 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 XPO4Q9C0E2 1151 aaKnown RBP16.45■□□□□ 0.22
MCF2L-218ENST00000442625 IFNKQ9P0W0 207 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-218ENST00000442625 NDUFA8P51970 172 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 GABPB1Q06547 395 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-218ENST00000442625 ARMCX5Q6P1M9 558 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 PCDHA7Q9UN72 937 aa16.45■□□□□ 0.22
MCF2L-218ENST00000442625 SLU7O95391 586 aaKnown RBP16.44■□□□□ 0.22
MCF2L-218ENST00000442625 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms