RNA–Protein interactions for RNA: ENST00000441588.5

RPE-212, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 4

Gene RPE, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-212ENST00000441588 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
RPE-212ENST00000441588 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
RPE-212ENST00000441588 SLC10A4Q96EP9 437 aa12.15□□□□□ -0.46
RPE-212ENST00000441588 PTPN18Q99952 460 aa12.15□□□□□ -0.46
RPE-212ENST00000441588 ARHGAP39Q9C0H5 1083 aa12.15□□□□□ -0.46
RPE-212ENST00000441588 STXBP5LQ9Y2K9 1186 aa12.15□□□□□ -0.46
RPE-212ENST00000441588 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
RPE-212ENST00000441588 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
RPE-212ENST00000441588 UBE2Q1Q7Z7E8 422 aa12.14□□□□□ -0.47
RPE-212ENST00000441588 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPE-212ENST00000441588 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
RPE-212ENST00000441588 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
RPE-212ENST00000441588 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
RPE-212ENST00000441588 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
RPE-212ENST00000441588 PDIA6Q15084 440 aa12.13□□□□□ -0.47
RPE-212ENST00000441588 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 PRDM6Q9NQX0 595 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 MTMR10Q9NXD2 777 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
RPE-212ENST00000441588 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
RPE-212ENST00000441588 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
RPE-212ENST00000441588 COL1A1P02452 1464 aaPredicted RBP12.11□□□□□ -0.47
RPE-212ENST00000441588 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
RPE-212ENST00000441588 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
RPE-212ENST00000441588 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
RPE-212ENST00000441588 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
RPE-212ENST00000441588 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
RPE-212ENST00000441588 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
RPE-212ENST00000441588 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
RPE-212ENST00000441588 ANKIB1Q9P2G1 1089 aa12.11□□□□□ -0.47
RPE-212ENST00000441588 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
RPE-212ENST00000441588 TAF1CQ15572 869 aaPredicted RBP12.1□□□□□ -0.47
RPE-212ENST00000441588 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
RPE-212ENST00000441588 HSP90AB3PQ58FF7 597 aa12.1□□□□□ -0.47
RPE-212ENST00000441588 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
RPE-212ENST00000441588 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
RPE-212ENST00000441588 RAPGEFL1Q9UHV5 662 aa12.1□□□□□ -0.47
RPE-212ENST00000441588 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
RPE-212ENST00000441588 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
RPE-212ENST00000441588 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
RPE-212ENST00000441588 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
RPE-212ENST00000441588 BRI3BPQ8WY22 251 aa12.09□□□□□ -0.47
RPE-212ENST00000441588 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
RPE-212ENST00000441588 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
RPE-212ENST00000441588 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
RPE-212ENST00000441588 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
RPE-212ENST00000441588 DEFB129Q9H1M3 183 aa12.08□□□□□ -0.48
RPE-212ENST00000441588 ELP3Q9H9T3 547 aa12.08□□□□□ -0.48
RPE-212ENST00000441588 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
RPE-212ENST00000441588 EVI5O60447 810 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
RPE-212ENST00000441588 CCL5P13501 91 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 COL9A1P20849 921 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 GJA8P48165 433 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPE-212ENST00000441588 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPE-212ENST00000441588 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 FAM43AQ8N2R8 423 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 OGFOD1Q8N543 542 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 ZFYVE28Q9HCC9 887 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
RPE-212ENST00000441588 MGAMO43451 1857 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 CTGFP29279 349 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 BCAMP50895 628 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
RPE-212ENST00000441588 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
RPE-212ENST00000441588 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
RPE-212ENST00000441588 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
RPE-212ENST00000441588 CCL15-CCL14A0A0B4J2E2 113 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
RPE-212ENST00000441588 GJB1P08034 283 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 CCL15Q16663 113 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 NBPF12Q5TAG4 269 aaPredicted RBP12.05□□□□□ -0.48
RPE-212ENST00000441588 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 XDHP47989 1333 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 AOX1Q06278 1338 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
RPE-212ENST00000441588 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
RPE-212ENST00000441588 CLRN2A0PK11 232 aa12.04□□□□□ -0.48
RPE-212ENST00000441588 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
RPE-212ENST00000441588 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
RPE-212ENST00000441588 USP2O75604 605 aaPredicted RBP12.04□□□□□ -0.48
RPE-212ENST00000441588 IREB2P48200 963 aaKnown RBP12.04□□□□□ -0.48
RPE-212ENST00000441588 CCDC85AQ96PX6 553 aaPredicted RBP12.04□□□□□ -0.48
RPE-212ENST00000441588 GDF15Q99988 308 aa12.04□□□□□ -0.48
RPE-212ENST00000441588 ZMYND8Q9ULU4 1186 aaPredicted RBP12.04□□□□□ -0.48
RPE-212ENST00000441588 RPTORQ8N122 1335 aa12.04□□□□□ -0.48
RPE-212ENST00000441588 MYO3BQ8WXR4 1341 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms