RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ZNF446Q9NWS9 450 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 ASAP1Q9ULH1 1129 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
LTBR-203ENST00000441074 THRAP3Q9Y2W1 955 aaKnown RBP13.95□□□□□ -0.18
LTBR-203ENST00000441074 GOLGA6L19H0YKK7 550 aa13.94□□□□□ -0.18
LTBR-203ENST00000441074 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
LTBR-203ENST00000441074 H2AFXP16104 143 aaPredicted RBP13.94□□□□□ -0.18
LTBR-203ENST00000441074 PTH1RQ03431 593 aa13.94□□□□□ -0.18
LTBR-203ENST00000441074 CCAR2Q8N163 923 aaKnown RBP13.94□□□□□ -0.18
LTBR-203ENST00000441074 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
LTBR-203ENST00000441074 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
LTBR-203ENST00000441074 GLI3P10071 1580 aa13.94□□□□□ -0.18
LTBR-203ENST00000441074 NR1I2O75469 434 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 A1BGP04217 495 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 CCZ1BP86790 482 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
LTBR-203ENST00000441074 MTX1Q13505 466 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
LTBR-203ENST00000441074 ARID5BQ14865 1188 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 NECTIN1Q15223 517 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 BARGINQ6ZT62 677 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 PIGBQ92521 554 aa13.93□□□□□ -0.18
LTBR-203ENST00000441074 BCL11BQ9C0K0 894 aaPredicted RBP13.93□□□□□ -0.18
LTBR-203ENST00000441074 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
LTBR-203ENST00000441074 ZNF330Q9Y3S2 320 aaPredicted RBP13.93□□□□□ -0.18
LTBR-203ENST00000441074 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
LTBR-203ENST00000441074 CAPN2P17655 700 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 KSR2Q6VAB6 950 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 L2HGDHQ9H9P8 463 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 ST7Q9NRC1 585 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
LTBR-203ENST00000441074 CLASRPQ8N2M8 674 aaKnown RBP13.92□□□□□ -0.18
LTBR-203ENST00000441074 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 EP400Q96L91 3159 aa13.92□□□□□ -0.18
LTBR-203ENST00000441074 LRP10Q7Z4F1 713 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 SEPT12Q8IYM1 358 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 FHOD1Q9Y613 1164 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 HIP1O00291 1037 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
LTBR-203ENST00000441074 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 PSMA5P28066 241 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 OS9Q13438 667 aaPredicted RBP13.91□□□□□ -0.18
LTBR-203ENST00000441074 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
LTBR-203ENST00000441074 ECHDC1Q9NTX5 307 aa13.91□□□□□ -0.18
LTBR-203ENST00000441074 TRMT1Q9NXH9 659 aaKnown RBP13.91□□□□□ -0.18
LTBR-203ENST00000441074 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 ALDH1L1O75891 902 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 ANKRD1Q15327 319 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
LTBR-203ENST00000441074 TMOD3Q9NYL9 352 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 C9orf78Q9NZ63 289 aaPredicted RBP13.9□□□□□ -0.18
LTBR-203ENST00000441074 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.9□□□□□ -0.18
LTBR-203ENST00000441074 CTAGE5O15320 804 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 HNRNPH2P55795 449 aaKnown RBP13.9□□□□□ -0.18
LTBR-203ENST00000441074 GSDMDP57764 484 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 STX1AQ16623 288 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 ACSBG1Q96GR2 724 aa13.9□□□□□ -0.18
LTBR-203ENST00000441074 EXOC5O00471 708 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 DDB1Q16531 1140 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 CCDC93Q567U6 631 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
LTBR-203ENST00000441074 MYD88Q99836 296 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 CDCA7Q9BWT1 371 aaPredicted RBP13.89□□□□□ -0.19
LTBR-203ENST00000441074 DISP2A7MBM2 1401 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 TUBB4AP04350 444 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 ANKRD13DQ6ZTN6 518 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
LTBR-203ENST00000441074 RBM8AQ9Y5S9 174 aaKnown RBP13.89□□□□□ -0.19
LTBR-203ENST00000441074 ADAMTS7Q9UKP4 1686 aa13.88□□□□□ -0.19
LTBR-203ENST00000441074 BECN2A8MW95 431 aa13.88□□□□□ -0.19
LTBR-203ENST00000441074 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
LTBR-203ENST00000441074 CLCN6P51797 869 aa13.88□□□□□ -0.19
LTBR-203ENST00000441074 SNW1Q13573 536 aaKnown RBP13.88□□□□□ -0.19
LTBR-203ENST00000441074 IFIT2P09913 472 aaKnown RBP13.87□□□□□ -0.19
LTBR-203ENST00000441074 PLA2G4AP47712 749 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 MAP4K1Q92918 833 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 GTF3C6Q969F1 213 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
LTBR-203ENST00000441074 IMPACTQ9P2X3 320 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 SIPA1L3O60292 1781 aaPredicted RBP13.87□□□□□ -0.19
LTBR-203ENST00000441074 NPHP1O15259 732 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 RESTQ13127 1097 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 TEX35Q5T0J7 233 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 DHX40Q8IX18 779 aaKnown RBP13.87□□□□□ -0.19
LTBR-203ENST00000441074 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
LTBR-203ENST00000441074 KAZALD1Q96I82 304 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms