RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 MTFR1Q15390 333 aa12.16□□□□□ -0.46
RPE-210ENST00000438204 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
RPE-210ENST00000438204 ZC3H12CQ9C0D7 883 aaKnown RBP12.16□□□□□ -0.46
RPE-210ENST00000438204 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
RPE-210ENST00000438204 INHBEP58166 350 aa12.15□□□□□ -0.46
RPE-210ENST00000438204 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
RPE-210ENST00000438204 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
RPE-210ENST00000438204 SLC10A4Q96EP9 437 aa12.15□□□□□ -0.46
RPE-210ENST00000438204 PTPN18Q99952 460 aa12.15□□□□□ -0.46
RPE-210ENST00000438204 ARHGAP39Q9C0H5 1083 aa12.15□□□□□ -0.46
RPE-210ENST00000438204 STXBP5LQ9Y2K9 1186 aa12.15□□□□□ -0.46
RPE-210ENST00000438204 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
RPE-210ENST00000438204 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
RPE-210ENST00000438204 UBE2Q1Q7Z7E8 422 aa12.14□□□□□ -0.47
RPE-210ENST00000438204 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPE-210ENST00000438204 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
RPE-210ENST00000438204 EYSQ5T1H1 3165 aa12.14□□□□□ -0.47
RPE-210ENST00000438204 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
RPE-210ENST00000438204 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
RPE-210ENST00000438204 PDIA6Q15084 440 aa12.13□□□□□ -0.47
RPE-210ENST00000438204 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 PRDM6Q9NQX0 595 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 MTMR10Q9NXD2 777 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
RPE-210ENST00000438204 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
RPE-210ENST00000438204 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
RPE-210ENST00000438204 COL1A1P02452 1464 aaPredicted RBP12.11□□□□□ -0.47
RPE-210ENST00000438204 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
RPE-210ENST00000438204 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
RPE-210ENST00000438204 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
RPE-210ENST00000438204 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
RPE-210ENST00000438204 APOBEC3FQ8IUX4 373 aaKnown RBP12.11□□□□□ -0.47
RPE-210ENST00000438204 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
RPE-210ENST00000438204 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
RPE-210ENST00000438204 ANKIB1Q9P2G1 1089 aa12.11□□□□□ -0.47
RPE-210ENST00000438204 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
RPE-210ENST00000438204 TAF1CQ15572 869 aaPredicted RBP12.1□□□□□ -0.47
RPE-210ENST00000438204 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
RPE-210ENST00000438204 HSP90AB3PQ58FF7 597 aa12.1□□□□□ -0.47
RPE-210ENST00000438204 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
RPE-210ENST00000438204 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
RPE-210ENST00000438204 RAPGEFL1Q9UHV5 662 aa12.1□□□□□ -0.47
RPE-210ENST00000438204 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
RPE-210ENST00000438204 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
RPE-210ENST00000438204 DACT2Q5SW24 774 aa12.09□□□□□ -0.47
RPE-210ENST00000438204 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
RPE-210ENST00000438204 BRI3BPQ8WY22 251 aa12.09□□□□□ -0.47
RPE-210ENST00000438204 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
RPE-210ENST00000438204 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
RPE-210ENST00000438204 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
RPE-210ENST00000438204 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
RPE-210ENST00000438204 DEFB129Q9H1M3 183 aa12.08□□□□□ -0.48
RPE-210ENST00000438204 ELP3Q9H9T3 547 aa12.08□□□□□ -0.48
RPE-210ENST00000438204 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
RPE-210ENST00000438204 EVI5O60447 810 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
RPE-210ENST00000438204 CCL5P13501 91 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 COL9A1P20849 921 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 GJA8P48165 433 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPE-210ENST00000438204 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPE-210ENST00000438204 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 FAM43AQ8N2R8 423 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 OGFOD1Q8N543 542 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 ZFYVE28Q9HCC9 887 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
RPE-210ENST00000438204 MGAMO43451 1857 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 CTGFP29279 349 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 BCAMP50895 628 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
RPE-210ENST00000438204 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 PNISRQ8TF01 805 aaKnown RBP12.06□□□□□ -0.48
RPE-210ENST00000438204 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
RPE-210ENST00000438204 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
RPE-210ENST00000438204 CCL15-CCL14A0A0B4J2E2 113 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
RPE-210ENST00000438204 GJB1P08034 283 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 CCL15Q16663 113 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 NBPF12Q5TAG4 269 aaPredicted RBP12.05□□□□□ -0.48
RPE-210ENST00000438204 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 XDHP47989 1333 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 AOX1Q06278 1338 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
RPE-210ENST00000438204 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
RPE-210ENST00000438204 CLRN2A0PK11 232 aa12.04□□□□□ -0.48
RPE-210ENST00000438204 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
RPE-210ENST00000438204 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
RPE-210ENST00000438204 USP2O75604 605 aaPredicted RBP12.04□□□□□ -0.48
RPE-210ENST00000438204 IREB2P48200 963 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms