RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	FOXP2	O15409	715 aa		18.95	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ZFY	P08048	801 aa	Predicted RBP	18.95	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	APOBR	Q0VD83	1088 aa		18.95	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.95	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	TMOD3	Q9NYL9	352 aa		18.95	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	PTPDC1	A2A3K4	754 aa		18.94	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	FGD1	P98174	961 aa		18.94	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	XAGE2	Q96GT9	111 aa		18.94	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	MYH15	Q9Y2K3	1946 aa		18.94	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ADORA1	P30542	326 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CAMK4	Q16566	473 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CCDC158	Q5M9N0	1113 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	RCOR1	Q9UKL0	485 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	KIF3A	Q9Y496	699 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	RIC1	Q4ADV7	1423 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CDHR2	Q9BYE9	1310 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	NWD2	Q9ULI1	1742 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	NR1I2	O75469	434 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	PDIA3	P30101	505 aa	Known RBP	18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ATL3	Q6DD88	541 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CHMP4C	Q96CF2	233 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	TTC12	Q9H892	705 aa	Predicted RBP	18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	SPTLC3	Q9NUV7	552 aa		18.93	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	DNAJC10	Q8IXB1	793 aa		18.92	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ZNF830	Q96NB3	372 aa	Predicted RBP	18.92	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CTNNA3	Q9UI47	895 aa		18.92	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	TPM3	P06753	285 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	TTC39A	Q5SRH9	613 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	TTLL5	Q6EMB2	1281 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	SASS6	Q6UVJ0	657 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	KIF6	Q6ZMV9	814 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CKAP2L	Q8IYA6	745 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	MAP3K15	Q6ZN16	1313 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	BICD2	Q8TD16	824 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	PIGB	Q92521	554 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	STRN4	Q9NRL3	753 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ASAP1	Q9ULH1	1129 aa		18.91	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	SCARF1	Q14162	830 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	MPND	Q8N594	471 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	FAM89A	Q96GI7	184 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	CBX8	Q9HC52	389 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	DDX60	Q8IY21	1712 aa	Known RBP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	NHSL1	Q5SYE7	1610 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	IFIT5	Q13325	482 aa	Known RBP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	ANO6	Q4KMQ2	910 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	TDRD7	Q8NHU6	1098 aa	Known RBP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	APPBP2	Q92624	585 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	NCOA5	Q9HCD5	579 aa	Known RBP	18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	RIPOR2	Q9Y4F9	1068 aa		18.9	■□□□□ 0.62
HLA-DQB2-231	ENST00000435145	STRC	Q7RTU9	1775 aa		18.89	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	EVA1C	P58658	441 aa		18.89	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CCT2	P78371	535 aa	Known RBP	18.89	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	LUZP1	Q86V48	1076 aa		18.89	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.89	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	STARD3NL	O95772	234 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CAVIN2	O95810	425 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	GORAB	Q5T7V8	394 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ILDR1	Q86SU0	546 aa	Predicted RBP	18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	KCNF1	Q9H3M0	494 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	LRP6	O75581	1613 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CARMIL3	Q8ND23	1372 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	DISP2	A7MBM2	1401 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	UQCRHL	A0A096LP55	91 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	UQCRH	P07919	91 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	FDPS	P14324	419 aa	Known RBP	18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ZAP70	P43403	619 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	NLRP10	Q86W26	655 aa		18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.88	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	WDR19	Q8NEZ3	1342 aa		18.87	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	FGA	P02671	866 aa		18.87	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	IMMT	Q16891	758 aa	Known RBP	18.87	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	KIAA1524	Q8TCG1	905 aa		18.87	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ZNF396	Q96N95	335 aa	Predicted RBP	18.87	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	USP28	Q96RU2	1077 aa		18.87	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PLCB2	Q00722	1185 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ATP2B3	Q16720	1220 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CHST3	Q7LGC8	479 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	TTLL11	Q8NHH1	800 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ITGB4	P16144	1822 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ATRN	O75882	1429 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	GOLGA6L6	A8MZA4	724 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	DYNC1I1	O14576	645 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	CTAGE5	O15320	804 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	WASHC4	Q2M389	1173 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	HSP90AB3P	Q58FF7	597 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	TAF7L	Q5H9L4	462 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	VGLL2	Q8N8G2	317 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PUS7L	Q9H0K6	701 aa	Known RBP	18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ANKRD36C	Q5JPF3	1778 aa		18.86	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	MYH7	P12883	1935 aa		18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	AKAP11	Q9UKA4	1901 aa		18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	HLF	Q16534	295 aa		18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	PLA2G4D	Q86XP0	818 aa		18.85	■□□□□ 0.61
HLA-DQB2-231	ENST00000435145	ENGASE	Q8NFI3	743 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms