RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OSBPL5Q9H0X9 879 aaPredicted RBP6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 OSBPL3Q9H4L5 887 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 HOMER3Q9NSC5 361 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 ANO10Q9NW15 660 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 SPHKAPQ2M3C7 1700 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 MYO3AQ8NEV4 1616 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 EFCAB6Q5THR3 1501 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 TOPBP1Q92547 1522 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 TTC21BQ7Z4L5 1316 aa6.49□□□□□ -1.37
VTI1BP4-201ENST00000427516 FANCD2Q9BXW9 1451 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 CDC42BPAQ5VT25 1732 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 AATKQ6ZMQ8 1374 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 CCDC69A6NI79 296 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 TXLNAP40222 546 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 PRPHP41219 470 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 MLLT3P42568 568 aaPredicted RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 SLC8A3P57103 927 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 GNL2Q13823 731 aaKnown RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 PKP1Q13835 747 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 DCTN1Q14203 1278 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 ERCC6LQ2NKX8 1250 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 ATL3Q6DD88 541 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 BRAPQ7Z569 592 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 TTC13Q8NBP0 860 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 TATDN2Q93075 761 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 THUMPD2Q9BTF0 503 aaKnown RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 TEX13AQ9BXU3 409 aaPredicted RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 TMX1Q9H3N1 280 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 CLSTN2Q9H4D0 955 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 DCTPP1Q9H773 170 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 CBX8Q9HC52 389 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 NOB1Q9ULX3 412 aaKnown RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 NSFL1CQ9UNZ2 370 aaKnown RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 GPATCH8Q9UKJ3 1502 aaKnown RBP6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 SAMD9LQ8IVG5 1584 aa6.48□□□□□ -1.37
VTI1BP4-201ENST00000427516 FIBPO43427 364 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 PPFIA3O75145 1194 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 TADA3O75528 432 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 ITGBL1O95965 494 aaPredicted RBP6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 INPP5BP32019 993 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 USP5P45974 858 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 MRPL12P52815 198 aaKnown RBP6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 EVCP57679 992 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 ANO6Q4KMQ2 910 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 FILIP1LQ4L180 1135 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 RCSD1Q6JBY9 416 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 GIMAP6Q6P9H5 292 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 PLEKHM2Q8IWE5 1019 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 AMOTL1Q8IY63 956 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 ARMC2Q8NEN0 867 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 RNF217Q8TC41 542 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 MAGEC3Q8TD91 643 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 CACTINQ8WUQ7 758 aaKnown RBP6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 SSH1Q8WYL5 1049 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 LRCH3Q96II8 777 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 RSRC1Q96IZ7 334 aaKnown RBP6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 BCL2L13Q9BXK5 485 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 ETAA1Q9NY74 926 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 VPS18Q9P253 973 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 TSR3Q9UJK0 312 aaKnown RBP6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 CFAP45Q9UL16 551 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 LIMCH1Q9UPQ0 1083 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 ABCC4O15439 1325 aa6.47□□□□□ -1.37
VTI1BP4-201ENST00000427516 URB2Q14146 1524 aaKnown RBP6.46□□□□□ -1.37
VTI1BP4-201ENST00000427516 GOLGA6L10A6NI86 522 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 ZBTB7BO15156 539 aaPredicted RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 GIGYF1O75420 1035 aaPredicted RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 TBC1D8O95759 1140 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 SH3BGRP55822 239 aaPredicted RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 PIP4K2BP78356 416 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 LMNB2Q03252 620 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 EXOSC9Q06265 439 aaKnown RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 ADCY2Q08462 1091 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 APOBRQ0VD83 1088 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 BIRC2Q13490 618 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCDC70Q6NSX1 233 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 YTHDF3Q7Z739 585 aaKnown RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 AFAP1L1Q8TED9 768 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 RUBCNQ92622 972 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 SMARCC1Q92922 1105 aaPredicted RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 MIEF2Q96C03 454 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 PPP1R13BQ96KQ4 1090 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 BPIFA3Q9BQP9 254 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 PDRG1Q9NUG6 133 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 PNMA3Q9UL41 463 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 INO80Q9ULG1 1556 aaPredicted RBP6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 HPS5Q9UPZ3 1129 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 AK9Q5TCS8 1911 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 KIAA0556O60303 1618 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 ABCA6Q8N139 1617 aa6.46□□□□□ -1.38
VTI1BP4-201ENST00000427516 CDC42BPBQ9Y5S2 1711 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 A0A0G2JS52 829 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 CCDC189A1A4V9 331 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 MAP2K7O14733 419 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 ARHGAP6O43182 974 aa6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 GADD45BO75293 160 aaPredicted RBP6.45□□□□□ -1.38
VTI1BP4-201ENST00000427516 NEBLO76041 1014 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms